LOCUS BC101242 944 bp mRNA linear HUM 01-NOV-2006
DEFINITION Homo sapiens olfactory receptor, family 5, subfamily F, member 1,
mRNA (cDNA clone IMAGE:40023024), partial cds.
ACCESSION BC101242
VERSION BC101242.3
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 944)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 944)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-AUG-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Nov 1, 2006 this sequence version replaced BC101242.2.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 7 Row: j Column: 24.
FEATURES Location/Qualifiers
source 1..944
/db_xref="H-InvDB:HIT000336642"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:40023024"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_283"
/note="Vector: pCR-Blunt II-TOPO with reversed insert;
Clone identification sequence tag: GGTAAATC sequenced from
the forward primer"
gene <1..944
/gene="OR5F1"
/gene_synonym="OR11-10"
/db_xref="GeneID:338674"
/db_xref="HGNC:HGNC:8343"
/db_xref="MIM:608492"
CDS <1..944
/gene="OR5F1"
/gene_synonym="OR11-10"
/codon_start=3
/product="OR5F1 protein"
/protein_id="AAI01243.1"
/db_xref="GeneID:338674"
/db_xref="HGNC:HGNC:8343"
/db_xref="MIM:608492"
/translation="TRKNYTSLTEFVLLGLADTLELQIILFLFFLVIYTLTVLGNLGM
ILLIRIDSQLHTPMYFFLANLSFVDVCNSTTITPKMLADLLSEKKTISFAGCFLQMYF
FISLATTECILFGLMAYDRYAAICRPLLYSLIMSRTVYLKMAAGAFAAGLLNFMVNTS
HVSSLSFCDSNVIHHFFCDSPPLFKLSCSDTILKESISSILAGVNIVGTLLVILSSYS
YVLFSIFSMHSGEGRHRAFSTCASHLTAIILFYATCIYTYLRPSSSYSLNQDKVASVF
YTVVIPMLNPLIYSLRNKEVKKALANVISRKRTSSFL"
BASE COUNT 217 a 245 c 187 g 295 t
ORIGIN
1 tgaccagaaa aaattatacc tcactgactg agttcgtcct attgggatta gcagacacgc
61 tggagctaca gattatcctc tttttgtttt ttcttgtgat ttatacactt acagtactgg
121 gaaatctcgg gatgatcctc ttaatcagga tcgattccca gcttcacaca cccatgtatt
181 tcttcctggc taacctgtcc tttgtggacg tttgtaactc aactaccatc accccaaaga
241 tgctggcaga tttattatca gagaagaaaa ccatctcttt tgctggctgc ttcctacaga
301 tgtacttctt tatctccctg gcgacaaccg aatgcatcct ctttgggtta atggcctatg
361 accggtatgc ggccatatgt cgcccgctgc tttactcctt gatcatgtcc aggaccgtct
421 acctaaaaat ggcagccggg gcttttgctg cagggttgct gaacttcatg gtcaacacaa
481 gccatgtcag cagcttgtca ttctgtgact ccaatgtcat ccatcacttc ttctgtgaca
541 gtcccccact tttcaagctc tcttgttctg acacaatcct gaaagaaagc ataagttcta
601 ttttggctgg tgtgaatatt gtggggactc tgcttgtcat cctctcctcc tactcctacg
661 ttctcttctc cattttttct atgcattcgg gggaggggag gcacagagct ttctccacgt
721 gtgcctctca cctgacagcc ataattctgt tctatgccac ctgcatctat acttacctga
781 gacctagttc cagctactcc ctgaatcagg acaaagtggc ttctgtgttc tacacagtgg
841 tgattcccat gttgaatcct ctgatctaca gcctcaggaa taaggaagta aagaaggctt
901 tagcgaatgt aattagcagg aaaaggacct cttcctttct gtga
//