LOCUS BC101064 3248 bp mRNA linear HUM 04-OCT-2006
DEFINITION Homo sapiens leucine rich repeat containing 15, mRNA (cDNA clone
MGC:119586 IMAGE:40008605), complete cds.
ACCESSION BC101064
VERSION BC101064.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3248)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3248)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-AUG-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 5 Row: i Column: 15.
FEATURES Location/Qualifiers
source 1..3248
/db_xref="H-InvDB:HIT000336474"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:119586 IMAGE:40008605"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_282"
/note="Vector: pCR-Blunt II-TOPO; Clone identification
sequence tag: AAAAATCT sequenced from the reverse primer"
gene 1..3248
/gene="LRRC15"
/gene_synonym="LIB"
/db_xref="GeneID:131578"
/db_xref="HGNC:HGNC:20818"
CDS 132..1877
/gene="LRRC15"
/gene_synonym="LIB"
/codon_start=1
/product="leucine rich repeat containing 15"
/protein_id="AAI01065.1"
/db_xref="GeneID:131578"
/db_xref="HGNC:HGNC:20818"
/translation="MPLKHYLLLLVGCQAWGAGLAYHGCPSECTCSRASQVECTGARI
VAVPTPLPWNAMSLQILNTHITELNESPFLNISALIALRIEKNELSRITPGAFRNLGS
LRYLSLANNKLQVLPIGLFQGLDSLESLLLSSNQLLQIQPAHFSQCSNLKELQLHGNH
LEYIPDGAFDHLVGLTKLNLGKNSLTHISPRVFQHLGNLQVLRLYENRLTDIPMGTFD
GLVNLQELALQQNQIGLLSPGLFHNNHNLQRLYLSNNHISQLPPSVFMQLPQLNRLTL
FGNSLKELSPGIFGPMPNLRELWLYDNHISSLPDNVFSNLRQLQVLILSRNQISFISP
GAFNGLTELRELSLHTNALQDLDGNVFRMLANLQNISLQNNRLRQLPGNIFANVNGLM
AIQLQNNQLENLPLGIFDHLGKLCELRLYDNPWRCDSDILPLRNWLLLNQPRLGTDTV
PVCFSPANVRGQSLIIINVNVAVPSVHVPEVPSYPETPWYPDTPSYPDTTSVSSTTEL
TSPVEDYTDLTTIQVTDDRSVWGMTQAQSGLAIAAIVIGIVALACSLAACVGCCCCKK
RSQAVLMQMKAPNEC"
BASE COUNT 714 a 991 c 791 g 752 t
ORIGIN
1 cagccttgag ccgtccctcg tcctcctctc aggctccctc ttgtccacgg cgggcgggcg
61 ccgagctgct gatgtgtccc tagcataacc tggccccatt cctttgcatc tagatgcctt
121 tggacaaggc tatgccactg aagcattatc tccttttgct ggtgggctgc caagcctggg
181 gtgcagggtt ggcctaccat ggctgcccta gcgagtgtac ctgctccagg gcctcccagg
241 tggagtgcac cggggcacgc attgtggcag tgcccacccc tctgccctgg aacgccatga
301 gcctgcagat cctcaacacg cacatcactg aactcaatga gtccccgttc ctcaatatct
361 cagccctcat cgccctgagg attgagaaga atgagctgtc gcgcatcacg cctggggcct
421 tccgaaacct gggctcgctg cgctatctca gcctcgccaa caacaagctg caggttctgc
481 ccatcggcct cttccagggc ctggacagcc tcgagtctct ccttctgtcc agtaaccagc
541 tgttgcagat ccagccggcc cacttctccc agtgcagcaa cctcaaggag ctgcagttgc
601 acggcaacca cctggaatac atccctgacg gagccttcga ccacctggta ggactcacga
661 agctcaatct gggcaagaat agcctcaccc acatctcacc cagggtcttc cagcacctgg
721 gcaacctcca ggtcctccgg ctgtatgaga acaggctcac ggatatcccc atgggcactt
781 ttgatgggct tgttaacctg caggaactgg ctctgcagca gaaccagatt ggactgctct
841 cccctggtct cttccacaac aaccacaacc tccagagact ctacctgtcc aacaaccaca
901 tctcccagct gccacccagc gtcttcatgc agctgcccca gctcaaccgt cttactctct
961 ttgggaattc cctgaaggag ctctctccgg ggatcttcgg gcccatgccc aacctgcggg
1021 agctttggct ctatgacaac cacatctctt ctctacccga caatgtcttc agcaacctcc
1081 gccagttgca ggtcctgatt cttagccgca atcagatcag cttcatctcc ccgggtgcct
1141 tcaacgggct aacggagctt cgggagctgt ccctccacac caacgcactg caggacctgg
1201 acgggaacgt cttccgcatg ttggccaacc tgcagaacat ctccctgcag aacaaccgcc
1261 tcagacagct cccagggaat atcttcgcca acgtcaatgg cctcatggcc atccagctgc
1321 agaacaacca gctggagaac ttgcccctcg gtatcttcga tcacctgggg aaactgtgtg
1381 agctgcggct gtatgacaat ccctggaggt gtgactcaga catccttccg ctccgcaact
1441 ggctcctgct caaccagcct aggttaggga cggacactgt acctgtgtgt ttcagcccag
1501 ccaatgtccg aggccagtcc ctcattatca tcaatgtcaa cgttgctgtt ccaagcgtcc
1561 atgtccccga ggtgcctagt tacccagaaa caccatggta cccagacaca cccagttacc
1621 ctgacaccac atccgtctct tctaccactg agctaaccag ccctgtggaa gactacactg
1681 atctgactac cattcaggtc actgatgacc gcagcgtttg gggcatgacc caggcccaga
1741 gcgggctggc cattgccgcc attgtaattg gcattgtcgc cctggcctgc tccctggctg
1801 cctgcgtcgg ctgttgctgc tgcaagaaga ggagccaagc tgtcctgatg cagatgaagg
1861 cacccaatga gtgttaaaga ggcaggctgg agcagggctg gggaatgatg ggactggagg
1921 acctgggaat ttcatctttc tgcctccacc cctgggtcca tggagctttc ccgtgattgc
1981 tctttctggc cccagagaaa ggtgagccta cctcttcctg acttgcctga ttctcccgta
2041 gagaagcagg tcgtgccgga ccttcctaca atcaggaaga tagatccaac tggccatggc
2101 aaaagccctg gggatttccg attcataacc ctgggcttcc ttcgagaggg ctcttcctcc
2161 aaatcctccc cacctgtcct ccaagaacag ccttccctgc gcccaggccc cctccgggcc
2221 tctgtagact cagttagtcc acagcctgct cacttcgtgg gaatagttct ccgctgagat
2281 agcccctctc gcctaagtat tatgtaagtt gatttccctt cttttgtttc tcttgtttgt
2341 gctacggctt gacccagcat gtcccctcaa atgaaagttc tccccttgat tttctgctcc
2401 tgaaggcagg gtgagttctc tcctcaaaga agacttcaaa ccatttaact ggtttcttaa
2461 gagccgtcaa tcagcctggt tttggggatg ctatgaaaga gagaaggaaa atcatgccgc
2521 tcagttcctg gagacagaag agccgtcatc agtgtctcac ttgtgatttt tatctggaaa
2581 aggaagaaac accccagcac agcaagctca gccttttaga gaaggatatt tccaaactgc
2641 aaactttgct ttgaaaagtt tagcccttta aggaatgaaa tcatgtagaa ttttggactt
2701 ctaaaaacat taaaatcagc ttattaatac gggatagaga aagaaatctg gtgcctgggg
2761 gtccctgtgt tcacccctag agtttgtttt aaaattttta attgaagcat gtgaagtgta
2821 cgtgcagaaa agtgggaaca tgatagtgta tggcttggtg gattttcaca aactgaacat
2881 acctgtgtaa tcagcatcta gacccagacc cagagcatca caaatatccc ccatcctggg
2941 cttttcccag aggagatggg ggcttctgaa gatggactta cctgggacct gccccccatg
3001 agccaggacg gtccccccac agtcagcctg tgcaaaggcc ccgtggccag gggtggagga
3061 gaatatgtgg gtgtggacag gatgggagac tgtggcctga acaggagatt ttattatatc
3121 tggagaccct gagagaccct gagacctggg gcaccatggc tggccaggtc agaagcatcc
3181 tgactgcaga ggtccgtgca gccacaccct cttccctgcc agcaagctgt ctgcggctca
3241 tcggaggc
//