LOCUS BC101031 2423 bp mRNA linear HUM 04-OCT-2006 DEFINITION Homo sapiens UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 (GalNAc-T13), mRNA (cDNA clone MGC:119458 IMAGE:40007710), complete cds. ACCESSION BC101031 VERSION BC101031.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2423) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2423) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-AUG-2005) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Baylor Human Genome Sequencing Center cDNA Library Preparation: Baylor Human Genome Sequencing Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAM Plate: 7 Row: e Column: 5. FEATURES Location/Qualifiers source 1..2423 /db_xref="H-InvDB:HIT000336442" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:119458 IMAGE:40007710" /tissue_type="PCR rescued clones" /clone_lib="NIH_MGC_282" /note="Vector: pCR-Blunt II-TOPO; Clone identification sequence tag: ACTACAAA sequenced from the reverse primer" gene 1..2423 /gene="GALNT13" /gene_synonym="GalNAc-T13" /gene_synonym="KIAA1918" /db_xref="GeneID:114805" /db_xref="HGNC:HGNC:23242" /db_xref="MIM:608369" CDS 1..1671 /gene="GALNT13" /gene_synonym="GalNAc-T13" /gene_synonym="KIAA1918" /codon_start=1 /product="UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 (GalNAc-T13)" /protein_id="AAI01032.1" /db_xref="GeneID:114805" /db_xref="HGNC:HGNC:23242" /db_xref="MIM:608369" /translation="MRRFVYCKVVLATSLMWVLVDVFLLLYFSECNKCDDKKERSLLP ALRAVISRNQEGPGEMGKAVLIPKDDQEKMKELFKINQFNLMASDLIALNRSLPDVRL EGCKTKVYPDELPNTSVVIVFHNEAWSTLLRTVYSVINRSPHYLLSEVILVDDASERD FLKLTLENYVKNLEVPVKIIRMEERSGLIRARLRGAAASKGQVITFLDAHCECTLGWL EPLLARIKEDRKTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDR RKGDRTLPVRTPTMAGGLFSIDRNYFEEIGTYDAGMDIWGGENLEMSFRIWQCGGSLE IVTCSHVGHVFRKATPYTFPGGTGHVINKNNRRLAEVWMDEFKDFFYIISPGVVKVDY GDVSVRKTLRENLKCKPFSWYLENIYPDSQIPRRYYSLGEIRNVETNQCLDNMGRKEN EKVGIFNCHGMGGNQVFSYTADKEIRTDDLCLDVSRLNGPVIMLKCHHMRGNQLWEYD AERLTLRHVNSNQCLDEPSEEDKMVPTMQDCSGSRSQQWLLRNMTLGT" BASE COUNT 774 a 408 c 530 g 711 t ORIGIN 1 atgaggagat ttgtctactg caaggtggtt ctagccactt cgctgatgtg ggttcttgtt 61 gatgtcttct tactgctgta cttcagtgaa tgtaacaaat gtgatgacaa gaaggagaga 121 tctctgctgc ctgcattgag ggctgttatt tcaagaaacc aagaagggcc aggagaaatg 181 ggaaaagctg tgttgattcc taaagatgac caggagaaaa tgaaagagct gtttaaaatc 241 aatcagttta accttatggc cagtgatttg attgccctta atagaagtct gccagatgta 301 agattagaag gatgtaagac aaaagtctac cctgatgaac ttccaaacac aagtgtagtc 361 attgtgtttc ataatgaagc ttggagcact ctccttagaa ctgtttacag tgtgataaat 421 cgttccccac actatctact ctcagaggtc atcttggtag atgatgccag tgaaagagat 481 tttctcaagt tgacattaga gaattacgtg aaaaatttag aagtgccagt aaaaattatt 541 aggatggaag aacgctctgg gttaatacgt gcccgtcttc gaggagcagc tgcttcaaaa 601 gggcaggtca taacttttct tgatgcacac tgtgaatgca cgttaggatg gctggagcct 661 ttgctggcaa gaataaagga agacaggaaa acggttgtct gccctatcat tgatgtgatt 721 agtgatgata cttttgaata tatggctggg tcagacatga cttatggggg ttttaactgg 781 aaactgaatt tccgctggta tcctgttccc caaagagaaa tggacaggag gaaaggagac 841 agaacattac ctgtcaggac ccctactatg gctggtggcc tattttctat tgacagaaac 901 tactttgaag agataggaac ttacgatgca ggaatggata tctggggtgg agagaatctt 961 gaaatgtctt ttaggatttg gcaatgtgga ggctccttgg agattgttac ttgctcccat 1021 gttggtcatg tttttcggaa ggcaactcca tacacttttc ctggtggcac tggtcatgtc 1081 atcaacaaga acaacaggag actggcagaa gtttggatgg atgaatttaa agatttcttc 1141 tacatcatat ccccaggtgt tgtcaaagtg gattatggag atgtgtcagt cagaaaaaca 1201 ctaagagaaa atctgaagtg taagcccttt tcttggtacc tagaaaacat ctatccggac 1261 tcccagatcc caagacgtta ttactcactt ggtgagataa gaaatgttga aaccaatcag 1321 tgtttagaca acatgggccg caaggaaaat gaaaaagtgg gtatattcaa ctgtcatggt 1381 atgggaggaa atcaggtatt ttcttacact gctgacaaag aaatccgaac cgatgacttg 1441 tgcttggatg tttctagact caatggacct gtaatcatgt taaaatgcca ccatatgaga 1501 ggaaatcagt tatgggaata tgatgctgag agactcacgt tgcgacatgt taacagtaac 1561 caatgtctcg atgaaccttc tgaagaagac aaaatggtgc ctacaatgca ggactgtagt 1621 ggaagcagat cccaacagtg gctgctaagg aacatgacct tgggcacatg aagatcatgt 1681 cctccaagcc atgaaagtgt ctacgctttt gtttttccat tatttcaatt gggggaaaat 1741 attaactttg ctgaattgaa agttttaaaa atccttttag tattctaaaa cacaattgtt 1801 tctaattcgt ttctagaaat gtttgcttat ttccctacta aaatttgtat ctgatcaaag 1861 cacataagaa tataaataat agcaaactac tattaaacaa cagaacaact tgtaaaacaa 1921 attgtgtttg ctttaagaaa aatctttatt gcactcatgt catagggtta attggaggtt 1981 attttatttt tggttgtcat ggtgattgaa agagataatg taaatgcctt ataaaatctt 2041 cattatgaaa tattatcagt tgctttataa actcactctt tttatggatc cttcatggaa 2101 acatgtttga tttctgtgtc tacaacaggg ccacatatta aattacttct gaatggtgaa 2161 ttcatcttac aaaatgttcc aagttttgga caaggaaaaa cattacattg gatattgaat 2221 tcatggagcc tttacagaag catcacattt aaaccaatgt gaattcaaaa aagagaagga 2281 aactttttaa attcaattta gagtacataa aaaaagaaat ccgcgaagca ttgaggggaa 2341 caagatgagt ctaatccgca gcacttcgat cactgtgaga gaactcaaag tgggttgcaa 2401 tcattcctaa cacaggctga aac //