LOCUS BC100986 1675 bp mRNA linear HUM 04-OCT-2006
DEFINITION Homo sapiens tripartite motif-containing 60, mRNA (cDNA clone
MGC:119325 IMAGE:40005597), complete cds.
ACCESSION BC100986
VERSION BC100986.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1675)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1675)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-AUG-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 12, 2005 this sequence version replaced BC100986.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 6 Row: h Column: 16.
FEATURES Location/Qualifiers
source 1..1675
/db_xref="H-InvDB:HIT000336398"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:119325 IMAGE:40005597"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_283"
/note="Vector: pCR-Blunt II-TOPO with reversed insert;
Clone identification sequence tag: CGAACAAC sequenced from
the forward primer"
gene 1..1675
/gene="TRIM60"
/gene_synonym="FLJ35882"
/db_xref="GeneID:166655"
/db_xref="HGNC:HGNC:21162"
CDS 235..1650
/gene="TRIM60"
/gene_synonym="FLJ35882"
/codon_start=1
/product="TRIM60 protein"
/protein_id="AAI00987.1"
/db_xref="GeneID:166655"
/db_xref="HGNC:HGNC:21162"
/translation="MEFVTALVNLQEESSCPICLEYLKDPVTINCGHNFCRSCLSVSW
KDLDDTFPCPVCRFCFPYKSFRRNPQLRNLTEIAKQLQIRRSKRKRQKENAMCEKHNQ
FLTLFCVKDLEILCTQCSFSTKHQKHYICPIKKAASYHREILEGSLEPLRNNIERVEK
VIILQGSKSVELKKKVEYKREEINSEFEQIRLFLQNEQEMILRQIQDEEMNILAKLNE
NLVELSDYVSTLKHLLREVEGKSVQSNLELLTQAKSMHHKYQNLKCPELFSFRLTKYG
FSLPPQYSGLDRIIKPFQVDVILDLNTAHPQLLVSEDRKAVRYERKKRNICYDPRRFY
VCPAVLGSQRFSSGRHYWEVEVGNKPKWILGVCQDCLLRNWQDQPSVLGGFWAIGRYM
KSGYVASGPKTTQLLPVVKPSKIGIFLDYELGDLSFYNMNDRSILYTFNDCFTEAVWP
YFYTGTDSEPLKICSVSDSER"
BASE COUNT 510 a 331 c 376 g 458 t
ORIGIN
1 ccaggtcatc agtttgcccc atcattggtt aaggtggtat tctctacatt ataaagggat
61 gaccgctgta ttataacctg tggctagttt attgaagaag aaaatcatta cacttagatt
121 cagacgggct cggccgggcg cggtggctca cgcctgtaat cccagcactt tgggaggccg
181 aggcgggtgg atcatgaggt caggagatcg agaccatcct ggctaacaag ctcgatggag
241 tttgtgacag ccctggtgaa cctccaagag gagtctagct gtcccatctg tctggagtac
301 ttgaaagacc cagtgaccat caactgtggg cacaacttct gtcgctcctg cctcagtgta
361 tcctggaagg atctagatga tacctttccc tgtcctgtct gccgtttttg ctttccatac
421 aagagcttca ggaggaaccc ccagctccgt aatttgactg aaattgctaa acaactccag
481 attaggagga gcaagagaaa gaggcagaaa gagaatgcca tgtgtgaaaa acacaaccag
541 tttctgaccc tcttctgtgt taaagatcta gagatcttat gtacacagtg cagtttctcc
601 actaaacacc agaagcacta catttgccct attaagaaag ctgcctctta tcacagagaa
661 attctagaag gtagccttga gcccttgagg aataatatag aacgagttga aaaagtgata
721 attctgcaag gcagcaaatc agtggagctg aaaaagaagg tagaatataa gagggaagaa
781 ataaattctg agtttgagca aataagattg tttttacaga atgaacaaga gatgattctt
841 aggcagatac aagatgaaga gatgaacatt ttagcaaaac taaatgaaaa ccttgtagaa
901 ctttcagatt atgtttccac attaaaacat ctactgaggg aggtagaggg caagtctgtg
961 cagtcaaacc tggaattact gacacaagct aagagtatgc accacaagta tcaaaaccta
1021 aaatgccctg aactcttttc atttagatta acaaaatatg gtttcagtct tcctcctcaa
1081 tattctggct tggacagaat tatcaagcca tttcaagtag atgtgattct agatctcaac
1141 acagcacatc ctcaacttct tgtctctgag gatagaaaag ctgtgcgata tgaaagaaaa
1201 aaacgaaaca tttgttatga cccaaggaga ttttatgtct gccctgctgt cctaggctct
1261 cagagattta gttctggccg acattactgg gaagtagaag tgggaaacaa acctaaatgg
1321 atattgggtg tgtgtcaaga ctgtcttctt aggaactggc aggatcagcc atcagttctg
1381 ggcggattct gggcaattgg gcgatacatg aagagtggtt atgttgcgtc aggtcctaag
1441 acaacccagc ttctgccagt agtaaaaccc agtaaaattg gtatttttct ggactatgaa
1501 ttgggtgatc tttcctttta taatatgaat gataggtcta ttctctatac ttttaacgat
1561 tgtttcacag aagccgtttg gccttatttc tatactggaa cagattccga acctcttaaa
1621 atctgctcag tatcagattc tgaaagataa ggaactggta aatgggtctg tttca
//