LOCUS BC100985 1501 bp mRNA linear HUM 04-OCT-2006
DEFINITION Homo sapiens tripartite motif-containing 60, mRNA (cDNA clone
MGC:119324 IMAGE:40005594), complete cds.
ACCESSION BC100985
VERSION BC100985.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1501)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1501)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-AUG-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 6 Row: h Column: 15.
FEATURES Location/Qualifiers
source 1..1501
/db_xref="H-InvDB:HIT000336397"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:119324 IMAGE:40005594"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_282"
/note="Vector: pCR-Blunt II-TOPO; Clone identification
sequence tag: TACATAAC sequenced from the reverse primer"
gene 1..1501
/gene="TRIM60"
/gene_synonym="FLJ35882"
/db_xref="GeneID:166655"
/db_xref="HGNC:HGNC:21162"
CDS 61..1476
/gene="TRIM60"
/gene_synonym="FLJ35882"
/codon_start=1
/product="tripartite motif-containing 60"
/protein_id="AAI00986.1"
/db_xref="GeneID:166655"
/db_xref="HGNC:HGNC:21162"
/translation="MEFVTALVNLQEESSCPICLEYLKDPVTINCGHNFCRSCLSVSW
KDLDDTFPCPVCRFCFPYKSFRRNPQLRNLTEIAKQLQIRRSKRKRQKENAMCEKHNQ
FLTLFCVKDLEILCTQCSFSTKHQKHYICPIKKAASYHREILEGSLEPLRNNIERVEK
VIILQGSKSVELKKKVEYKREEINSEFEQIRLFLQNEQEMILRQIQDEEMNILAKLNE
NLVELSDYVSTLKHLLREVEGKSVQSNLELLTQAKSMHHKYQNLKCPELFSFRLTKYG
FSLPPQYSGLDRIIKPFQVDVILDLNTAHPQLLVSEDRKAVRYERKKRNICYDPRRFY
VCPAVLGSQRFSSGRHYWEVEVGNKPKWILGVCQDCLLRNWQDQPSVLGGFWAIGRYM
KSGYVASGPKTTQLLPVVKPSKIGIFLDYELGDLSFYNMNDRSILYTFNDCFIEAVWP
YFYTGTDSEPLKICSVSDSER"
BASE COUNT 467 a 291 c 322 g 421 t
ORIGIN
1 ccaggtcatc agtttgcccc atcattggtt aaggtggtat tctctacatt ataaagctcg
61 atggagtttg tgacagccct ggtgaacctc caagaggagt ctagctgtcc catctgtctg
121 gagtacttga aagacccagt gaccatcaac tgtgggcaca acttctgtcg ctcctgcctc
181 agtgtatcct ggaaggatct agatgatacc tttccctgtc ctgtctgccg tttttgcttt
241 ccatacaaga gcttcaggag gaacccccag ctccgtaatt tgactgaaat tgctaaacaa
301 ctccagatta ggaggagcaa gagaaagagg cagaaagaga atgccatgtg tgaaaaacac
361 aaccagtttc tgaccctctt ctgtgttaaa gatctagaga tcttatgtac acagtgcagt
421 ttctccacta aacaccagaa gcactacatt tgccctatta agaaagctgc ctcttatcac
481 agagaaattc tagaaggtag ccttgagccc ttgaggaata atatagaacg agttgaaaaa
541 gtgataattc tgcaaggcag caaatcagtg gagctgaaaa agaaggtaga atataagagg
601 gaagaaataa attctgagtt tgagcaaata agattgtttt tacagaatga acaagagatg
661 attcttaggc agatacaaga tgaagagatg aacattttag caaaactaaa tgaaaacctt
721 gtagaacttt cagattatgt ttccacatta aaacatctac tgagggaggt agagggcaag
781 tctgtgcagt caaacctgga attactgaca caagctaaga gtatgcacca caagtatcaa
841 aacctaaaat gccctgaact cttttcattt agattaacaa aatatggttt cagtcttcct
901 cctcaatatt ctggcttgga cagaattatc aagccatttc aagtagatgt gattctagat
961 ctcaacacag cacatcctca acttcttgtc tctgaggata gaaaagctgt gcgatatgaa
1021 agaaaaaaac gaaacatttg ttatgaccca aggagatttt atgtctgccc tgctgtccta
1081 ggctctcaga gatttagttc tggccgacat tactgggaag tagaagtggg aaacaaacct
1141 aaatggatat tgggtgtgtg tcaagactgt cttcttagga actggcagga tcagccatca
1201 gttctgggcg gattctgggc aattgggcga tacatgaaga gtggttatgt tgcgtcaggt
1261 cctaagacaa cccagcttct gccagtagta aaacccagta aaattggtat ttttctggac
1321 tatgaattgg gtgatctttc cttttataat atgaatgata ggtctattct ctatactttt
1381 aacgattgtt tcatagaagc cgtttggcct tatttctata ctggaacaga ttccgaacct
1441 cttaaaatct gctcagtatc agattctgaa agataaggaa ctggtaaatg ggtctgtttc
1501 a
//