LOCUS BC100959 1254 bp mRNA linear HUM 04-OCT-2006
DEFINITION Homo sapiens spermatogenesis associated, serine-rich 1, mRNA (cDNA
clone MGC:119213 IMAGE:40004675), complete cds.
ACCESSION BC100959
VERSION BC100959.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1254)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1254)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-AUG-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 12, 2005 this sequence version replaced BC100959.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 5 Row: f Column: 18.
FEATURES Location/Qualifiers
source 1..1254
/db_xref="H-InvDB:HIT000336372"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:119213 IMAGE:40004675"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_283"
/note="Vector: pCR-Blunt II-TOPO with reversed insert;
Clone identification sequence tag: GTATAAAA sequenced from
the forward primer"
gene 1..1254
/gene="SPATS1"
/gene_synonym="FLJ25442"
/gene_synonym="SPATA8"
/gene_synonym="SRSP1"
/db_xref="GeneID:221409"
/db_xref="HGNC:HGNC:22957"
CDS 596..1153
/gene="SPATS1"
/gene_synonym="FLJ25442"
/gene_synonym="SPATA8"
/gene_synonym="SRSP1"
/codon_start=1
/product="SPATS1 protein"
/protein_id="AAI00960.1"
/db_xref="GeneID:221409"
/db_xref="HGNC:HGNC:22957"
/translation="MSLPEVQKDKYPEEFSLLKLQTKDGHRPEWTFYPRFSSNIHTYH
VGKQCFFNGVFLGNKRSLSERTVDKCFGRKKYDIDPRNGIPKLTPGDNPYMYPEQSKG
FHKAGSMLPPVNFSIVPYEKKFDTFIPLEPLPQIPNLPFWVKEKANSLKNEIQEVEEL
DNWQPAVPLMHMLHLSGALDFPRQS"
BASE COUNT 344 a 305 c 288 g 317 t
ORIGIN
1 caggtggagg gagtaaggct cccgtttaga ggccagtcct gccctcctga ctttcggtgg
61 cttgtggaat ttgtttgttt tgactgatac ctttcttacg agggactttc tttgtctctg
121 ggttgcttct aatatttaaa atcatcatgg gcacagatga gtccatccat gctcactaga
181 aacagtccac ggggctgccg tctcccctcc atctcaagca cgacctgcgg cagacagctg
241 gagaaggttc cagaaaaaag ggactctggc atgaccgagg tggagaggac ctacaagagc
301 accaccaaag cagagagtct cataaattac ctcactggat ctcacagcag tggagaagta
361 tattacctat gagtaaaggg agccagagat ttgacctgcc cagtgcttgg gttaataaaa
421 gggatgtttt gccaacacaa caccctctgg caaaagtgtc agttcctcat cttcagtgga
481 aacaggccca agtgtcagtg agcctcctgg cctccccaga gtgtctgctt acgtagacac
541 cactgctgac ttggatcgga aactctcctt ctcacattct gatcactcct ctgaaatgtc
601 gttgcctgaa gtccaaaagg ataaatatcc tgaggaattc agcctgctta agttgcagac
661 gaaagatggg catcgtcctg agtggacatt ttacccaagg tttagcagca acatccacac
721 ctaccacgtc ggaaagcagt gcttctttaa tggagtcttc ctcggcaaca agaggtctct
781 atcagagagg acggtggaca agtgctttgg gagaaagaaa tacgatattg atcccaggaa
841 tggaatccca aagttaactc caggcgacaa tccatatatg tacccagaac agagtaaagg
901 cttccacaaa gcaggatcaa tgctcccacc agtgaatttt tcaatagtgc cttatgaaaa
961 gaaatttgat acatttattc cacttgagcc tcttccacaa attcccaact tgcctttctg
1021 ggtgaaggag aaggccaaca gtttgaaaaa tgagatacaa gaggttgagg agcttgacaa
1081 ctggcagcca gcagtgccct taatgcacat gctacacctt tctggtgctt tggactttcc
1141 aagacaatcc tgagcataaa caggcccaca aaacatgtgc tgactgcact ctggcgaccc
1201 ttttccagtt gatgtttttt gtcatgtgac tgttctaaat ccagtgtttg accc
//