LOCUS BC100930 1165 bp mRNA linear HUM 19-MAR-2007 DEFINITION Homo sapiens DEP domain containing 4, mRNA (cDNA clone IMAGE:40003964), partial cds. ACCESSION BC100930 VERSION BC100930.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1165) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1165) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-AUG-2005) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Baylor Human Genome Sequencing Center cDNA Library Preparation: Baylor Human Genome Sequencing Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAM Plate: 6 Row: f Column: 16. FEATURES Location/Qualifiers source 1..1165 /db_xref="H-InvDB:HIT000386328" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:40003964" /tissue_type="PCR rescued clones" /clone_lib="NIH_MGC_282" /note="Vector: pCR-Blunt II-TOPO; Clone identification sequence tag: TAACACAA sequenced from the reverse primer" gene 1..>1165 /gene="DEPDC4" /gene_synonym="DEP.4" /db_xref="GeneID:120863" /db_xref="HGNC:HGNC:22952" CDS 4..>1165 /gene="DEPDC4" /gene_synonym="DEP.4" /codon_start=1 /product="DEPDC4 protein" /protein_id="AAI00931.1" /db_xref="GeneID:120863" /db_xref="HGNC:HGNC:22952" /translation="MVPGEEPARELMAVLLTPRFRRLVSQNELPGPGLNGPSSRNRRD GFCRKRRTGCSGPFQATQLWDGIIHSLQAQVEIKRRRHHLQTYKDCFTGSDAVDVVLS HLMQNTCLSSNDISCLKGVRLCQVLMNHKVFEPVGMKKLFKKEKELEFEDSNISLYRF LGNKSSYDCCKRQKDAENEFNETLRPGYEMISNPLAQEIGEERIEELIHTINGNPALC PNITVQKPFLRLSKEDVWKEQTLLCLLQLIHLPFLDNILEPPVKTQNLQLNKEEDLVI TNTCLDRELIPSLCLPEIDNWLNAAIECLEYFPDQLIVTVSQQLMQNRNEETRLNSQK KILFDVIAKYYAQERDCLLTDEYFDIHSGIIELLENEKRAEALEATQLYLRLL" BASE COUNT 387 a 212 c 247 g 319 t ORIGIN 1 gctatggtgc caggggagga gccagcgcgc gagcttatgg cggttctttt gactccgagg 61 ttccgtagac ttgtcagtca gaacgagctt ccgggcccag ggctgaacgg gccaagttcc 121 aggaaccgta gagatggctt ctgccggaaa aggaggacag gatgctctgg tccttttcaa 181 gctactcagc tatgggatgg tattattcac tctcttcagg cccaagtgga aataaaaaga 241 aggaggcatc atttacagac atacaaagac tgtttcactg gttctgatgc tgtcgatgtg 301 gtcttaagtc atcttatgca aaacacgtgc ctaagtagca atgacatctc ttgtcttaaa 361 ggggttcgtc tttgccaagt tctaatgaat cacaaagtat ttgaaccagt aggaatgaag 421 aagcttttca aaaaagaaaa ggaattagaa tttgaagatt ccaacattag tctctacagg 481 tttctaggca ataaatcatc ttacgattgt tgcaaaagac aaaaggatgc tgagaatgag 541 ttcaatgaaa ccttgagacc aggatatgaa atgatttcaa atcctctagc acaggagatt 601 ggtgaggaaa gaattgagga acttattcat acaataaatg ggaatccagc tttatgtcca 661 aatatcacag ttcagaaacc ttttctccgg ctttcaaaag aagatgtttg gaaagaacaa 721 acattattat gtcttcttca attgattcac cttccattct tggacaatat tttggagcct 781 ccagttaaaa cacaaaatct tcaactaaac aaagaggaag atcttgttat cactaacact 841 tgcctagaca gagaacttat tccaagctta tgtctacctg aaatcgataa ctggcttaat 901 gcagcaattg aatgcttgga gtatttccct gaccagttaa tagttacagt tagtcagcag 961 ttaatgcaaa acagaaatga agagacaaga ttgaacagtc agaagaagat actctttgat 1021 gtcatagcaa aatactatgc tcaagagaga gattgcctat taactgatga gtattttgat 1081 attcattcag gaattattga acttttagaa aatgagaaaa gagcagaagc acttgaagca 1141 acacaactat atctaagatt gctgt //