LOCUS BC100928 1003 bp mRNA linear HUM 19-MAR-2007
DEFINITION Homo sapiens DEP domain containing 4, mRNA (cDNA clone
IMAGE:40003961), partial cds.
ACCESSION BC100928
VERSION BC100928.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1003)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1003)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-AUG-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 17, 2005 this sequence version replaced BC100928.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 6 Row: e Column: 16.
FEATURES Location/Qualifiers
source 1..1003
/db_xref="H-InvDB:HIT000336343"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:40003961"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_283"
/note="Vector: pCR-Blunt II-TOPO with reversed insert;
Clone identification sequence tag: GTATAATC sequenced from
the forward primer"
gene 1..>1003
/gene="DEPDC4"
/gene_synonym="DEP.4"
/db_xref="GeneID:120863"
/db_xref="HGNC:HGNC:22952"
CDS 4..>1003
/gene="DEPDC4"
/gene_synonym="DEP.4"
/codon_start=1
/product="DEPDC4 protein"
/protein_id="AAI00929.1"
/db_xref="GeneID:120863"
/db_xref="HGNC:HGNC:22952"
/translation="MVPGEEPARELMAVLLTPRFRRLVSQNELPGPGLNGPSSRNRRD
GFCRKRRTGVHLCQVLMNHKVFEPVGMKKLFKKEKELEFEDSNISLYRFLGNKSSYDC
CKRQKDAENEFNETLRPGYEMISNPLAQEIGEERIEELIHTINGNPALCPNITVQKPF
LRLSKEGVSFYTAITSDKTDVWKEQTLLCLLQLIHLPFLDNILEPPVKTQNLQLNKEE
DLVITNTCLDRELIPSLCLPEIDNWLNAAIECLEYFPDQLIVTVSQQLMQNRNEETRL
NSQKKILFDVIAKYYAQERDCLLTDEYFDIHSGIIELLENEKRAEALEATQLYLRLL"
BASE COUNT 345 a 180 c 210 g 268 t
ORIGIN
1 gctatggtgc caggggagga gccagcgcgc gagcttatgg cggttctttt gactccgagg
61 ttccgtagac ttgtcagtca gaacgagctt ccgggcccag ggctgaacgg gccaagttcc
121 aggaaccgta gagatggctt ctgccggaaa aggaggacag gggttcatct ttgccaagtt
181 ctaatgaatc acaaagtatt tgaaccagta ggaatgaaga agcttttcaa aaaagaaaag
241 gaattagaat ttgaagattc caacattagt ctctacaggt ttctaggcaa taaatcatct
301 tacgattgtt gcaaaagaca aaaggatgct gagaatgagt tcaatgaaac cttgagacca
361 ggatatgaaa tgatttcaaa tcctctagca caggagattg gtgaggaaag aattgaggaa
421 cttattcata caataaatgg gaatccagct ttatgtccaa atatcacagt tcagaaacct
481 tttctccggc tttcaaaaga aggagtttcc ttctacacag caattacatc agataagaca
541 gatgtttgga aagaacaaac attattatgt cttcttcaat tgattcacct tccattcttg
601 gacaatattt tggagcctcc agttaaaaca caaaatcttc aactaaacaa agaggaagat
661 cttgttatca ctaacacttg cctagacaga gaacttattc caagcttatg tctacctgaa
721 atcgataact ggcttaatgc agcaattgaa tgcttggagt atttccctga ccagttaata
781 gttacagtta gtcagcagtt aatgcaaaac agaaatgaag agacaagatt gaacagtcag
841 aagaagatac tctttgatgt catagcaaaa tactatgctc aagagagaga ttgcctatta
901 actgatgagt attttgatat tcattcagga attattgaac ttttagaaaa tgagaaaaga
961 gcagaagcac ttgaagcaac acaactatat ctaagattgc tgt
//