LOCUS       BC100872                 642 bp    mRNA    linear   HUM 18-MAR-2009
DEFINITION  Homo sapiens interferon, epsilon, mRNA (cDNA clone MGC:119020
            IMAGE:40003065), complete cds.
ACCESSION   BC100872
VERSION     BC100872.2
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 642)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 642)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (01-AUG-2005) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     On Aug 12, 2005 this sequence version replaced BC100872.1.
            Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Baylor Human Genome Sequencing Center
            cDNA Library Preparation: Baylor Human Genome Sequencing Center
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Sequencing Group at the Stanford Human Genome
            Center, Stanford University School of Medicine, Stanford, CA  94305
            Web site:       http://www-shgc.stanford.edu
            Contact:  (Dickson, Mark) mcd@paxil.stanford.edu
            Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
            R. M.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAM Plate: 6 Row: d Column: 19.
FEATURES             Location/Qualifiers
     source          1..642
                     /db_xref="H-InvDB:HIT000336294"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:119020 IMAGE:40003065"
                     /tissue_type="PCR rescued clones"
                     /clone_lib="NIH_MGC_283"
                     /note="Vector: pCR-Blunt II-TOPO with reversed insert;
                     Clone identification sequence tag: TGACTTT sequenced from
                     the forward primer"
     gene            1..642
                     /gene="IFNE"
                     /gene_synonym="IFN-E"
                     /gene_synonym="IFNE1"
                     /gene_synonym="IFNT1"
                     /gene_synonym="PRO655"
                     /db_xref="GeneID:338376"
                     /db_xref="HGNC:HGNC:18163"
     CDS             7..633
                     /gene="IFNE"
                     /gene_synonym="IFN-E"
                     /gene_synonym="IFNE1"
                     /gene_synonym="IFNT1"
                     /gene_synonym="PRO655"
                     /codon_start=1
                     /product="interferon, epsilon"
                     /protein_id="AAI00873.1"
                     /db_xref="GeneID:338376"
                     /db_xref="HGNC:HGNC:18163"
                     /translation="MIIKHFFGTVLVLLASTTIFSLDLKLIIFQQRQVNQESLKLLNK
                     LQTLSIQQCLPHRKNFLLPQKSLSPQQYQKGHTLAILHEMLQQIFSLFRANISLDGWE
                     ENHTEKFLIQLHQQLEYLEALMGLEAEKLSGTLGSDNLRLQVKMYFRRIHDYLENQDY
                     STCAWAIVQVEISRCLFFVFSLTEKLSKQGRPLNDMKQELTTEFRSPR"
BASE COUNT          198 a          143 c          136 g          165 t
ORIGIN      
        1 ttcaccatga ttatcaagca cttctttgga actgtgttgg tgctgctggc ctctaccact
       61 atcttctctc tagatttgaa actgattatc ttccagcaaa gacaagtgaa tcaagaaagt
      121 ttaaaactct tgaataagtt gcaaaccttg tcaattcagc agtgtctacc acacaggaaa
      181 aactttctgc ttcctcagaa gtctttgagt cctcagcagt accaaaaagg acacactctg
      241 gccattctcc atgagatgct tcagcagatc ttcagcctct tcagggcaaa tatttctctg
      301 gatggttggg aggaaaacca cacggagaaa ttcctcattc aacttcatca acagctagaa
      361 tacctagaag cactcatggg actggaagca gagaagctaa gtggtacttt gggtagtgat
      421 aaccttagat tacaagttaa aatgtacttc cgaaggatcc atgattacct ggaaaaccag
      481 gactacagca cctgtgcctg ggccattgtc caagtagaaa tcagccgatg tctgttcttt
      541 gtgttcagtc tcacagaaaa actgagcaaa caaggaagac ccttgaacga catgaagcaa
      601 gagcttacta cagagtttag aagcccgagg taggtggagg ga
//