LOCUS BC100669 2199 bp mRNA linear HUM 13-OCT-2006 DEFINITION Homo sapiens raftlin, lipid raft linker 1, mRNA (cDNA clone MGC:118867 IMAGE:40001190), complete cds. ACCESSION BC100669 VERSION BC100669.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2199) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2199) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-AUG-2005) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Baylor Human Genome Sequencing Center cDNA Library Preparation: Baylor Human Genome Sequencing Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAM Plate: 4 Row: a Column: 12. FEATURES Location/Qualifiers source 1..2199 /db_xref="H-InvDB:HIT000336189" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:118867 IMAGE:40001190" /tissue_type="PCR rescued clones" /clone_lib="NIH_MGC_283" /note="Vector: pCR-Blunt II-TOPO with reversed insert; Clone identification sequence tag: ATATTGTG" gene 1..2199 /gene="RFTN1" /gene_synonym="FLJ23866" /gene_synonym="KIAA0084" /gene_synonym="MIG2" /gene_synonym="PIB10" /gene_synonym="PIG9" /gene_synonym="RAFTLIN" /db_xref="GeneID:23180" /db_xref="HGNC:HGNC:30278" CDS 107..1843 /gene="RFTN1" /gene_synonym="FLJ23866" /gene_synonym="KIAA0084" /gene_synonym="MIG2" /gene_synonym="PIB10" /gene_synonym="PIG9" /gene_synonym="RAFTLIN" /codon_start=1 /product="raftlin, lipid raft linker 1" /protein_id="AAI00670.2" /db_xref="GeneID:23180" /db_xref="HGNC:HGNC:30278" /translation="MGCGLNKLEKRDEKRPGNIYSTLKRPQVETKIDVSYEYRFLEFT TLSAAELPGSSAVRLASLRDLPAQLLELYQQGFSLAALHPFVQPTHEREKTPLEHIFR AILIKKTDRSQKTDLHNEGYILELDCCSSLDHPTDQKLIPEFIKKIQEAASQGLKFVG VIPQYHSSVNSAGSSAPVSTANSTEDARDAKNARGDHASLENEKPGTGDVCSAPAGRN QSPEPSSGPRGEVPLAKQPSSPSGEGDGGELSPQGVSKTLDGPESNPLEVHEEPLSGK MEIFTLFNKPKSHQKCRQYYPVTIPLHVSKNGQTVSGLDANWLEHMSDHFRKGGMLVN AVFYLGIVNDSLHGLTDGVFIFEAVSTEDSKTIQGYDAIVVEQWTVLEGVEVQTDYVP LLNSLAAYGWQLTCVLPTPVVKTTSEGSVSTKQIVFLQRPCLPQKIKKKESKFQWRFS REEMHNRQMRKSKGKLSARDKQQAEENEKNLEDQSSKAGDMGNCVSGQQQEGGVSEEM KGPVQEDKGEQLSPGGLLCGVGVEGEAVQNGPASHSRALVGICTGHSNPGEDARDGDA EEVRELGTVEEN" BASE COUNT 550 a 576 c 624 g 449 t ORIGIN 1 cgccgcctcc tctgtatggc acaaactttc ctcccgggac ggaacacgct gcctcaggga 61 gcccgcgacc gcgccttctc ctccgccggt cccatacgct gctgaaatgg gttgcggatt 121 gaacaagtta gagaaacgtg atgaaaaacg gcctgggaat atttattcaa ctttgaagag 181 gcctcaggtg gaaaccaaga tagatgtgtc ctatgaatac cgcttcctgg agttcacgac 241 tctgagtgct gcggagctcc ctgggtcctc agcagtgagg ctggcctccc tgcgtgacct 301 gcccgcccag ctcctggagc tgtaccagca gggcttctcg ctggcggccc tgcacccctt 361 cgtgcagccc acccatgagc gggagaagac gcccctggag cacatcttta gagccatcct 421 gatcaagaaa accgacagat ctcagaaaac tgatcttcac aatgaaggct acatcttgga 481 attagattgc tgttcctcct tagaccaccc gacagaccag aaactcatcc cagagttcat 541 taagaagatc caggaggctg caagccaggg cctgaaattc gttggtgtta tacctcagta 601 ccattcctct gtgaactcgg caggcagcag tgctccggtg tctactgcca acagcaccga 661 ggatgccaga gatgcaaaaa acgcacgtgg ggatcacgcg tcactggaga atgagaaacc 721 ggggactggg gatgtgtgca gtgctccggc tgggagaaac caaagcccag agcccagctc 781 aggccccaga ggggaggtgc ccctcgccaa gcagcccagc tcaccctccg gagagggaga 841 tggtggagaa ctttcaccac agggggtgag caagacactg gatggaccgg agagcaaccc 901 cttggaggtg catgaagagc cactctcagg gaaaatggag atcttcaccc ttttcaacaa 961 accgaagagc catcagaagt gccggcaata ctaccctgtc accattcctc tccatgtctc 1021 caagaatggc cagacagtga gcggtttgga cgccaactgg ttagagcaca tgagcgacca 1081 cttccggaaa ggaggcatgc tggtgaacgc agtcttctac cttggaatag tgaatgattc 1141 cttacatggc ttgacagatg gagtattcat ctttgaagct gtttccacag aagatagcaa 1201 aaccatacag ggctatgatg ctattgtggt tgaacaatgg acagtcctgg aaggtgtcga 1261 agtgcagaca gactacgtgc ccctgctgaa ctcgctggcg gcctatggct ggcagctcac 1321 ctgtgtgcta ccaactcccg tcgtcaagac taccagcgag gggagtgtat ccaccaagca 1381 gattgtcttt cttcagagac cgtgtctacc tcagaaaatc aagaagaagg aatcgaagtt 1441 tcagtggcga ttctccagag aagaaatgca caacaggcag atgaggaaat caaaaggtaa 1501 actcagtgcc agagacaaac aacaagcaga agaaaatgag aagaacttag aagaccagtc 1561 ttccaaagct ggagacatgg gaaactgtgt ttcgggacag cagcaggagg gtggagtctc 1621 cgaggagatg aagggccctg tccaagagga caagggagaa cagctgtccc ctggtggcct 1681 gctgtgtggg gtgggtgtgg agggtgaggc tgtgcagaat ggtcctgcca gccacagcag 1741 ggccctggtg gggatttgca ctgggcactc caatcctgga gaggatgcca gggacgggga 1801 tgctgaggaa gtcagagagc ttggtacggt tgaagaaaac tgagtcttgg gcaatttgtg 1861 ctaaaactag gtgagttgcc aaacccaagg catcttacca acagctggtt tgggggctgg 1921 tttccctggt gttgtgtgtt acctaccctt tggcttggct tgacctctcc ttgtgagctc 1981 acctgagccc tcccagggcc aggttcctga cagtgttggt ttttgcacat ccactggaaa 2041 ggtgtcatta atgacccagt gttagaatgc aagaggtcag gttattctag ccctcatggc 2101 tgaaggccca gtcctggctc caccactcct ccagccagag ggtctggacc atccagtgcc 2161 tgtcctcgcc acagggcctc cagggagcat tcgggtcaa //