LOCUS BC100027 3204 bp mRNA linear HUM 21-JUL-2006
DEFINITION Homo sapiens forkhead box L1, mRNA (cDNA clone MGC:111386
IMAGE:30920793), complete cds.
ACCESSION BC100027
VERSION BC100027.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3204)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3204)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-AUG-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mary Hendrix
cDNA Library Preparation: M. Bento Soares, University of Iowa
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 222 Row: b Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22779859.
FEATURES Location/Qualifiers
source 1..3204
/db_xref="H-InvDB:HIT000336158"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:111386 IMAGE:30920793"
/tissue_type="Chondrosarcoma Lung Metastasis"
/clone_lib="NIH_MGC_212"
/lab_host="DH10B"
/note="Vector: pYX-ASC"
gene 1..3204
/gene="FOXL1"
/gene_synonym="FKH6"
/gene_synonym="FREAC7"
/db_xref="GeneID:2300"
/db_xref="HGNC:HGNC:3817"
/db_xref="MIM:603252"
CDS 216..1253
/gene="FOXL1"
/gene_synonym="FKH6"
/gene_synonym="FREAC7"
/codon_start=1
/product="forkhead box L1"
/protein_id="AAI00028.1"
/db_xref="GeneID:2300"
/db_xref="HGNC:HGNC:3817"
/db_xref="MIM:603252"
/translation="MSHLFDPRLPALAASPMLYLYGPERPGLPLAFAPAAALAASGRA
ETPQKPPYSYIALIAMAIQDAPEQRVTLNGIYQFIMDRFPFYHDNRQGWQNSIRHNLS
LNDCFVKVPREKGRPGKGSYWTLDPRCLDMFENGNYRRRKRKPKPGPGAPEAKRPRAE
THQRSAEAQPEAGSGAGGSGPAISRLQAAPAGPSPLLDGPSPPAPLHWPGTASPNEDA
GDAAQSAAAVAVGQAARTGDGPGSPLRPASRSSPKSSDKSKSFSIDSILAGKQGQKPP
SGDELLGGAKPGPGGRLGASLLAASSSLRPPFNASLMLDPHVQGGFYQLGIPFLSYFP
LQVPDTVLHFQ"
BASE COUNT 719 a 916 c 895 g 674 t
ORIGIN
1 gctaagtcaa catataacag caaacttaca acaattattt aacattttta aagccatgaa
61 gaagggacag agcacggagc ggccggggag agcggcagag ccagaggcag aggcacggct
121 ggctccccgg gagggccctt gcggcgcggg gcgcagtgcc taggccgccc gggtctcctg
181 cgttgcgggg agcgcagcgc aggctctcgc ttgccatgag tcacctcttc gatccccggc
241 tgcctgccct ggccgcctcg cccatgctgt atctgtacgg tcccgagaga cccggcctcc
301 ctctggcctt cgcccccgcg gctgctctag ctgcctcggg ccgggccgag accccgcaga
361 agcctcccta cagctacatc gcgctcatcg ccatggcgat ccaggacgcg cccgagcaga
421 gggtcacgct caacggcatc taccagttca tcatggaccg cttccccttc taccacgaca
481 accggcaggg ctggcagaac agcatccgcc acaacctctc gctcaacgac tgcttcgtca
541 aggtgccccg cgagaaaggg cggccgggca agggcagcta ctggacgctg gacccccgct
601 gcctggacat gtttgagaac ggcaactacc ggcgccggaa gaggaagccc aagccgggcc
661 ccggggcccc ggaggccaag aggccccgcg ccgagacgca ccagcgcagc gcggaggcgc
721 agccggaggc ggggagcggg gcagggggct cgggccccgc aatctcccgc ctgcaggcag
781 cgcccgcggg cccctcgccc ctcctggacg gcccctctcc gccggcgccc ctccactggc
841 cggggaccgc gtccccgaac gaggacgctg gtgacgctgc ccagagcgca gcggccgtgg
901 cggtcggcca ggcagcgcgc acaggggacg gcccggggtc ccctctgcgc cccgcctccc
961 gcagctctcc gaagagctcc gacaagtcca agagcttcag catagacagc atcctggcgg
1021 gaaagcaggg ccagaagccg ccttcagggg acgaactcct agggggtgcc aagcctgggc
1081 ccggcggccg tctgggtgcc tcgctcctgg ccgcctcctc cagcctccgt ccgcctttca
1141 acgcttccct gatgctcgac ccgcatgtcc agggcggctt ttaccagctc gggatcccct
1201 tcctctctta tttccccctg caggttcccg acacggtact ccacttccag taaagcaaac
1261 aatggcacgg ttcttctccc ggcccagcct gagcctccgc tgagcgaaag gccacagctc
1321 ccaccggcgg aggattttaa aatgatcttt gcctgggtcg gcctgtgggt tcagggaagt
1381 gttaccaacc attgcgcgca ggtgggcgcg ctcgcctgcc ttctccgaag caaacttttc
1441 ccagcaactg ggagcagcta cggagactta aaagatcccc gcggggtcgt gggcaccgca
1501 cgtgggccct gcagggacct ccaccgcggg agattccttg acgtttgacc tgtctaatgg
1561 agtgtggtct tcagccgccc accgcaggtc ctgcgagtcc cgggcatgca agggcccgca
1621 gaccacccaa ggcaggcctt acaggtgcag ttgaggtcct ttcgaccggg gacccccgta
1681 tgaccgtcgc ctgcttcgct gttgccgtgt ggctcaggcc ttggttttga gcccatctgg
1741 gtggtgggtg gtcacagctg ggtttgttcc tgacttgaag ttgtggaggt gccgggggtg
1801 accccgggtt ttcaggtttt ctgagagatg tagggcccga tgaggattta tgaccaatgt
1861 tcagctatag aagctgataa ccacccagag caataacact tttattttaa acagagactt
1921 tttctcttaa tttctttctg ggtagtaaaa agaacatgtt tcattctttg cataaatact
1981 tgactctaag cattgacctt gaaaacgctt gtattaacaa tttttattaa gaaagtgcac
2041 tctatataac atcttcttgc attacgatag ctcattagcc aatacacatg cagctatgta
2101 acccaccaca gcagacgtcc tatccttttg cttttgtttt taagggatca aaatatttca
2161 agggatacca tgaggaaggg tgtgagggga aggggatatg ccttggacaa tgtcagagtt
2221 ttgatttcca tgttttttca agatccaggc ttggtggtcg ctatattttt cagaaacaga
2281 taatgaaaga ctacatttaa tttaaaaagt tgggtgaaac aaccaaaagc agatgcagag
2341 agagagaggg atgaatgcgg gggaagaata aggggacgtg ctggtgtccg ctggaagggg
2401 cctctctggg ccccagagga cctgaggttt gatggcagga atctcccaga cactcctggc
2461 ccccgcaccc cctgcagccg cccgctcttc cctcccagcc ctgccaggca ggcctggagg
2521 ctgatactaa atcaaaacct taaagaggtg actggcagtc tggggagggg agaagaggtc
2581 tgcaacgaaa atctaattaa gaacattgag atgttcacaa ccaagttcag cttgcagctt
2641 ccggggaaat gcaaccgacc tctatgccat ctctagctgg gtaatcttcg aggccctgaa
2701 atgcaatttt ctgaacctct aagtcacttt tattttatgt catgtgataa agacacaagt
2761 agtcacgcac tattggaaat aggttgggag ggaggtcttt aagatcgctt ttaaaatagt
2821 ttccaggact tgtctaaaaa tgatgacaaa ctttgaatcc agagggcctg ttggtcaatg
2881 tgttggaaag gacatttcag gccggcagag taattggata attcacaggc atagaggtga
2941 cttttggaaa attcattctc ctatccatgc tgaaccaggc ttccacgact gggttctacc
3001 caggccagtg ggaagactct gggaaacttc aggccagcct tgattggaag aacttccagg
3061 aggagccatt gctgagatcc aggctcactg tgattcactg aaaatgtagc gaaagggctg
3121 tcactggata ttttgctatc ccaaactctc agcctctgtg aataaagttg ttttttcatt
3181 aaaaaaaaaa aaaaaaaaaa aaaa
//