LOCUS BC100020 1160 bp mRNA linear HUM 09-SEP-2005
DEFINITION Homo sapiens F-box protein 32, mRNA (cDNA clone IMAGE:6148382),
partial cds.
ACCESSION BC100020
VERSION BC100020.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1160)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1160)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-AUG-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 232 Row: e Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22547143.
FEATURES Location/Qualifiers
source 1..1160
/db_xref="H-InvDB:HIT000336151"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6148382"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1160
/gene="FBXO32"
/gene_synonym="ATROGIN1"
/gene_synonym="Fbx32"
/gene_synonym="FLJ32424"
/gene_synonym="MAFbx"
/gene_synonym="MGC33610"
/db_xref="GeneID:114907"
/db_xref="MIM:606604"
CDS <1..898
/gene="FBXO32"
/gene_synonym="ATROGIN1"
/gene_synonym="Fbx32"
/gene_synonym="FLJ32424"
/gene_synonym="MAFbx"
/gene_synonym="MGC33610"
/codon_start=2
/product="FBXO32 protein"
/protein_id="AAI00021.1"
/db_xref="GeneID:114907"
/db_xref="MIM:606604"
/translation="DVAAKKRKKDMLNSKTKTQYFHQEKWIYVHKGSTKERHGYCTLG
EAFNRLDFSTAILDSRRFNYVVRLLELIAKSQLTSLSGIAQKNFMNILEKVVLKVLED
QQNIRLIRELLQTLYTSLCTLVQRVGKSVLVGNINMWVYRMETILHWQQQLNNIQITR
PAFKGLTFTDLPLCLQLNIMQRLSDGRDLVSLGQAAPDLHVLSEDRLLWKKLCQYHFS
ERQIRKRLILSDKGQLDWKKMYFKLVRCYPRKEQYGDTLQLCKHCHILSWKGTDHPCT
ANNPESCSVSLSPQDFINLFKF"
BASE COUNT 356 a 272 c 267 g 265 t
ORIGIN
1 tgatgttgca gccaagaaga gaaagaagga catgctgaat agcaaaacca aaactcagta
61 tttccaccaa gaaaaatgga tctatgttca caaaggaagt actaaagagc gccatggata
121 ttgcaccctg ggggaagctt tcaacagact ggacttctca actgccattc tggattccag
181 aagatttaac tacgtggtcc ggctgttgga gctgatagca aagtcacagc tcacatccct
241 gagtggcatc gcccaaaaga acttcatgaa tattttggaa aaagtggtac tgaaagtcct
301 tgaagaccag caaaacatta gactaataag ggaactactc cagaccctct acacatcctt
361 atgtacactg gtccaaagag tcggcaagtc tgtgctggtc gggaacatta acatgtgggt
421 gtatcggatg gagacgattc tccactggca gcagcagctg aacaacattc agatcaccag
481 gcctgccttc aaaggcctca ccttcactga cctgcctttg tgcctacaac tgaacatcat
541 gcagaggctg agcgacgggc gggacctggt cagcctgggc caggctgccc ccgacctgca
601 cgtgctcagc gaagaccggc tgctgtggaa gaaactctgc cagtaccact tctccgagcg
661 gcagatccgc aaacgattaa ttctgtcaga caaagggcag ctggattgga agaagatgta
721 tttcaaactt gtccgatgtt acccaaggaa agagcagtat ggagataccc ttcagctctg
781 caaacactgt cacatccttt cctggaaggg cactgaccat ccgtgcactg ccaataaccc
841 agagagctgc tccgtttcac tttcacccca ggactttatc aacttgttca agttctgaat
901 cccagcacat gacaacactt cagaagggtc cccctgctga ctggagagct gggaatatgg
961 catttggaca cttcatttgt aaatagtgta cattttaaac attggctcga aacttcagag
1021 ataagtcatg gagaggacat tggaggggag aaatgcagtt gctgactggg aatttaagaa
1081 tgtgaacttc tcactagaat tggtatggaa aagcaaaata ctgtaaataa actttttttc
1141 taacaaaaaa aaaaaaaaaa
//