LOCUS BC100016 3453 bp mRNA linear HUM 18-AUG-2006
DEFINITION Homo sapiens chromosome 4 open reading frame 18, mRNA (cDNA clone
IMAGE:5260703), partial cds.
ACCESSION BC100016
VERSION BC100016.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3453)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3453)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-AUG-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 198 Row: c Column: 20.
FEATURES Location/Qualifiers
source 1..3453
/db_xref="H-InvDB:HIT000336147"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5260703"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene <1..3453
/gene="C4orf18"
/gene_synonym="AD021"
/gene_synonym="AD036"
/gene_synonym="DKFZp434L142"
/gene_synonym="FLJ38155"
/db_xref="GeneID:51313"
/db_xref="HGNC:HGNC:25312"
CDS <1..851
/gene="C4orf18"
/gene_synonym="AD021"
/gene_synonym="AD036"
/gene_synonym="DKFZp434L142"
/gene_synonym="FLJ38155"
/codon_start=3
/product="C4orf18 protein"
/protein_id="AAI00017.1"
/db_xref="GeneID:51313"
/db_xref="HGNC:HGNC:25312"
/translation="VSSRSGARLLVLEGGAPGAVLRCGPSPCGLLKQPLDMSEVFAFH
LDRILGLNRTLPSVSRKAEFIQDGRPCPIILWDASLSSASNDTHSSVKLTWGTYQQLL
KQKCWQNGRVPKPESGCTEIHHHEWSKMALFDFLLQIYNRLDTNCCGFRPRKEDACVQ
NGLRPKCDDQGSAALAHIIQRKHDPRHLVFIDNKGFFDRSEDNLNFKLLEGIKEFPAS
AVSVLKSQHLRQKLLQSLFLDKVYWESQGGRQGIEKLIDVIEHRAKILITYINAHGVK
VLPMNE"
BASE COUNT 1083 a 622 c 587 g 1161 t
ORIGIN
1 ctgtatcctc taggagcgga gcccgtttgc tggtgctgga ggggggcgca cctggcgctg
61 tgctccgctg tggccctagc ccctgtgggc ttctcaagca gcccttggac atgagtgagg
121 tgtttgcctt ccacctagac aggatcctgg ggctcaacag gaccctgccg tctgtgagca
181 ggaaagcaga gttcatccaa gatggccgcc catgccccat cattctttgg gatgcatctt
241 tatcttcagc aagtaatgac acccattctt ctgttaagct cacctgggga acttatcagc
301 agttgctgaa acagaaatgc tggcagaatg gccgagtacc caagcctgaa tcaggttgta
361 ctgaaataca tcatcatgag tggtccaaga tggcactctt tgattttttg ttacagattt
421 ataatcgctt agatacaaat tgctgtggat tcagacctcg caaggaagat gcctgtgtac
481 agaatggatt gaggccaaaa tgtgatgacc aaggttctgc ggctctagca cacattatcc
541 agcgaaagca tgacccaagg catttggttt ttatagacaa caagggtttc tttgacagga
601 gtgaagataa cttaaacttc aaattgttag aaggcatcaa agagtttcca gcttctgcag
661 tttctgtttt gaagagccag cacttacggc agaaacttct tcagtctctg tttcttgata
721 aagtgtattg ggaaagtcaa ggaggtagac aaggaattga aaagcttatc gatgtaatag
781 aacacagagc caaaattctt atcacctata tcaatgcaca cggggtcaaa gtattaccta
841 tgaatgaatg acaaaagaat cttctggcta gggtgttaga tatatttatg catttttggt
901 tttgttttta aatcaagcac atcaacctca agcccgttta gcaatgaggc agtgtagatg
961 aatacgtaaa ataaatgact ttaaccaagt agctataatg ggacttagca ctgtatgcat
1021 acttaaaaag gttttgaaaa acaaactact tgagaaatat ttgtttatat ttttctctaa
1081 catcatgcta tgtgtcagtc tgaacatctg acaacagaaa tttcagttat tattctagct
1141 aagttttgaa aacatttgtc atgctgttta atagaaaact gcaaaccaga gatactgact
1201 ccattaataa accatatttt gtgccgtttt gactgttctg accaaatact aatgggaaca
1261 attcttgacg tttttctgtt gctgattgtt aacatagagc agtctctaca ctaccctgag
1321 gcaactctac attggaacac tgaggcttac agcctgcaag agcatcagag ctgaccatac
1381 atttaaacag aaatgctggt ttatttgcaa aatcaccagt atattttcta ttgtgtctat
1441 aaaaaatcag tcatttaagt acaagaatca tattttccat tcctttttag aaatttattt
1501 tgttgtccct atggaaatca ttcacatctg acaatttata tgttaaagag ttttactctc
1561 tctattttgg tccaatttgt atctagtggc tgagaaatta aataattcta aagtatgaag
1621 ttacctatct gaaaatgtac ttacagagta tcattttaaa atggatgtct ctttaaaaat
1681 tttgttactt ttaccaacaa tgtaatataa tttatgtata ttttattaat aatagtgaat
1741 tccttaaaat ttgttctatg tacttatatt taatttgatt taatggttac tgcccagata
1801 ttgagaaatg gttcaaatat tgagtgtgtt tcaatatatt atctggctta tttcaacatg
1861 agtaatatga gcaaaataag ttaaaacctg cgtctgatca attttcctca tgactagaac
1921 taaaacagta aatttggaca atattaagcc tcaaataatc atctccaaac tccttctaac
1981 actttttaaa tcagattgga agacatggac aaatcaggtt catgtgttgc atctttatgt
2041 cctttgccaa tatccaagat catcacatat ggtagatatt cacatggagt ttcaaattca
2101 gaatagatta ccattacctt cctgccctta cacatcctac tccttattta aaagttctat
2161 ttgtgacttt tcatttcctg aaagtttaaa aatacaattt gagaatgttt ataatacatt
2221 ctctcctgtc ttttcacggt tacgtctgtt attgctgaaa tacaccacat tttctttgtt
2281 ctggtcaagg ttaactcaat atctgtgtga aagagaacta ctaacaacgt tacaatagag
2341 gctagatttg aaaaaaaaaa tctatagatc taattgatac aattgtagaa caaaatgtca
2401 aaataatgtt ttaagtataa gagaagatgg accaaggaga gagagatcat ttgaaaatct
2461 aattgtagct tttctaggct cacattcatg tactactttt agcaccctta tgggctgtgc
2521 tcgccccctg gacagttgag ctttggatta tcttcctctt caattttccc tctattgacc
2581 cgagtgtctc cctctgcttc tacagattta tagtactcct tggctctttt gagtctccac
2641 ttttactcac tgtctctggg atttttaaga tccttttctt ctcttataaa tcatcctctt
2701 aatgaaaatt agcctaacaa aagtttggag actggaatcc tactttgagc cactgacttg
2761 aaataactct tttggcaagt tgcctgacat cctgtcttac caaggtggca tatttgcatt
2821 tttactgctt aaaacatttt ttttttttac catctttatc caaatttatc atattgatgg
2881 taggactaac aggcttttta gaagctggct ttaactttga gtctcaagct acaatgctgt
2941 tgggcagcct ggtcttccca cgtgagggtt taactttgtt tatttgcctc cagttattcc
3001 aaaatgctta ttaaatgaaa ggcccaggaa catgtttata ttagtcacct ttgcttttta
3061 acaattttgt tttgtaatca atgagtaatt catgatgaat tatttttgac taatggatag
3121 ccgaaggcca agcttttaat tctaataggt aatgttcttc ttttgtctta ttgaaacaat
3181 gagaatactc tgtgcatttc aaatgcactc cgattatgct gtggttttat tcacataagc
3241 acaatatgtg ttttatttat aacttcataa caaacttata atataataat ttaccttagc
3301 agacatgcaa aagcttattc ttgtgtgact tactttcttt aagctaataa tataaaaata
3361 aatatgtatc ttaaaaatct ataataaaac attagaaatt aaaaaaaaaa aaaaaaaaaa
3421 aaaaaaaaaa aaaaaagaaa aaaaaaaaaa aaa
//