LOCUS BC099877 818 bp mRNA linear ROD 03-AUG-2005
DEFINITION Mus musculus Mix1 homeobox-like 1 (Xenopus laevis), mRNA (cDNA
clone MGC:123453 IMAGE:40040048), complete cds.
ACCESSION BC099877
VERSION BC099877.1
KEYWORDS MGC.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 818)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 818)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (24-JUL-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 9 Row: k Column: 21.
FEATURES Location/Qualifiers
source 1..818
/organism="Mus musculus"
/mol_type="mRNA"
/db_xref="taxon:10090"
/clone="MGC:123453 IMAGE:40040048"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_284"
/note="Vector: pCR-Blunt II-TOPO; Clone identification
sequence tag: AGAAAATG"
gene 1..818
/gene="Mixl1"
/gene_synonym="Mm1"
/gene_synonym="Mml"
/db_xref="GeneID:27217"
/db_xref="MGI:MGI:1351322"
CDS 23..718
/gene="Mixl1"
/gene_synonym="Mm1"
/gene_synonym="Mml"
/codon_start=1
/product="Mix1 homeobox-like 1"
/protein_id="AAH99877.1"
/db_xref="GeneID:27217"
/db_xref="MGI:MGI:1351322"
/translation="MAAAGSQQLQFAEGAAFPIFPAAHPGGQLLPAMRPASGLPAAPH
DSRAPAATQCFPNRDSSPTAQTPAGLDPPGPSKGSAAPSAPQRRKRTSFSSEQLQLLE
LVFRQTMYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQSGKSFQPLSSRRGVFL
HCPAPGTEARCLKPQLPLEADVNHVPDPSMTGGGVCTSGSQSFETYSSLSEDIGSKLD
SWEEHIFSALGNF"
BASE COUNT 146 a 272 c 235 g 165 t
ORIGIN
1 tacagggaag cgtccgggag tcatggccgc agcagggtcc cagcagctcc agttcgcaga
61 aggcgccgct ttccccatct tccccgccgc gcatcccgga gggcagctgc tcccagccat
121 gcgcccagcc tctgggctgc ccgcggcgcc ccacgactct cgcgccccag cagccacgca
181 gtgctttcca aaccgcgact ccagtcccac agcgcagacc cccgccggcc tggatccgcc
241 cggaccctcc aaaggctcgg ccgccccgtc ggcgccacag cgccgcaagc gcacgtcgtt
301 cagctcggag cagctgcagt tgctggagct cgtcttccga cagaccatgt acccagacat
361 ccacttgcgg gagcgcctgg ctgcgctcac gctgctaccc gagtccagga tccaggtgtg
421 gttccagaac cgacgggcca agtccaggcg ccagagtggg aagtcatttc agcccttatc
481 ctcaaggcgg ggagttttcc tccattgccc tgctcctggg actgaagcta ggtgtttgaa
541 gcctcagctg cccctggagg cagatgtgaa ccacgttccg gatcccagca tgactggagg
601 aggcgtctgc acatctggtt ctcagagttt tgaaacgtat tcgtctctct ctgaagatat
661 tggctcaaag ttggactcct gggaggagca catcttttct gccttaggta acttctgagg
721 attctgggag cgttgaggat gcactcaggg agatctggga gattggagct gatctcctga
781 ctggccatgg cctcggttct ggatcatctc tcacattt
//