LOCUS BC099848 2798 bp mRNA linear HUM 21-JAN-2006
DEFINITION Homo sapiens chromosome 10 open reading frame 28, mRNA (cDNA clone
MGC:120644 IMAGE:40026916), complete cds.
ACCESSION BC099848
VERSION BC099848.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2798)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2798)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (24-JUL-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 4 Row: p Column: 22.
FEATURES Location/Qualifiers
source 1..2798
/db_xref="H-InvDB:HIT000336128"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:120644 IMAGE:40026916"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_283"
/note="Vector: pCR-Blunt II-TOPO with reversed insert;
Clone identification sequence tag: A"
gene 1..2798
/gene="C10orf28"
/gene_synonym="GIDRP86"
/gene_synonym="PSORT"
/db_xref="GeneID:27291"
/db_xref="HGNC:HGNC:23512"
/db_xref="IMGT/GENE-DB:23512"
/db_xref="MIM:23512"
CDS 237..2573
/gene="C10orf28"
/gene_synonym="GIDRP86"
/gene_synonym="PSORT"
/codon_start=1
/product="growth inhibition and differentiation related
protein 86"
/protein_id="AAH99848.1"
/db_xref="GeneID:27291"
/db_xref="HGNC:HGNC:23512"
/db_xref="IMGT/GENE-DB:23512"
/db_xref="MIM:23512"
/translation="MQQESERCRVRARRPDMALYVPKARRGAVLLKTGDEEESCGSPN
SVVKEKQKESSLSQKEVFKDKPEARRLNINPDRKEHNCREEKKSSTKLRMDTCLQKTN
RVCSKRGTTESKEVLSQGQQQGAPNAGVITNAPLQRHFKPKKVECLEVETTDVTGHER
ILLSQACLEISEAQVPSKPFQNVEFCDFSRHEPDGEAFEDKDLEGRIETDTKVLEILY
EFPRVFSSVMKPENMIVPIKLSSDSEIVQQSMQTSDGILNPSSGGITTTSVPGSPDGV
FDQTCVDFEVESVGGIANSTGFILDQKDTDSIPATMGHISLSESTNDTVSPVMIRECE
KNDSTADELHVKHEPPDTAVLAHETHRDSGFKNVGDITNKACMMDTTGMSCSDHVTVD
SPYVVAVRIADETSINTRSFSKFVGMSADATPLHVARSGNDTEDFSNPSACSDIYGES
ISSHFTESTGKLIESLSDCASSLPIKKIAGSNYNTFLDSELSMLNGTKVLSDSAVGID
LGSTGDTTEALHELRTAEEFKTEEQDASGSIEFGVSFPDRESSSMETSIEPKATETSH
TEGITAIEESWESMFNDDGDCLDPRLLQELSGNTKSRESIQEPRSDYYNHEVPDIDLS
DCEFPHVIEIYDFPQEFRTEDLLRVFCSYQKKGFDIKWVDDTHALGVFSSPITARDAL
GIKHTMVKIRPLSQATRAAKAKARAYAEFLQPAKERPETSAALARRLVISALGVRSKQ
SKTEREAELKKLQEARERKRLEAKQREDIWEGRDQSTV"
BASE COUNT 900 a 530 c 663 g 705 t
ORIGIN
1 gaagcggaga gcaacagcgc gccgagacgg agttttgcca tgttgtccag gctggtgtcg
61 aaatcctgag ctcaagtggt ctgcctgcct cggcttccca aagtgctggg attacaggtg
121 aggctgctgt cagaaaggaa cttttacaca gtttgccttc agagacagtc tatcggcatg
181 ttgtagagtt ttattactaa gaaaataaat gttacttaca tgattgtggt ggtgccatgc
241 agcaagaatc agagagatgc agagttagag ccagaaggcc tgacatggca ctttatgtac
301 ctaaagctcg taggggtgca gtactcctta agacaggtga tgaagaagaa agctgtggtt
361 cacctaactc tgtggtgaaa gaaaagcaaa aagaaagttc tctctcccaa aaagaagtct
421 ttaaagacaa accggaggct cgaagactaa atatcaatcc tgatagaaag gagcataatt
481 gtagagaaga aaagaaatct tcaacaaaat taagaatgga cacatgcctt caaaaaacaa
541 atagagtttg ttctaagaga ggaaccactg aatccaaaga agtattatcc caaggacaac
601 agcagggagc cccaaatgct ggggttataa ctaatgcacc tttgcagaga cattttaaac
661 caaagaaggt ggagtgtttg gaagttgaaa ctacggatgt gacaggacat gagaggatac
721 ttctttcaca ggcctgttta gaaatcagcg aggctcaagt tccaagcaaa ccattccaaa
781 atgtggaatt ctgtgacttc agtaggcatg aacctgatgg ggaagcattt gaagacaaag
841 atttggaagg cagaattgaa actgatacca aggttttgga gatactatat gagtttccta
901 gagtttttag ttctgtcatg aaacctgaga atatgattgt accaataaaa ctaagctctg
961 attctgaaat tgtacaacaa agcatgcaaa catcagatgg aatattgaat cccagcagcg
1021 gaggcatcac cactacttct gttcctggaa gtccagatgg tgtctttgat caaacttgcg
1081 tagattttga agttgagagt gtaggtggta tagccaatag tacaggtttc atcttagatc
1141 aaaaagatac agattccatt cctgcaacta tgggtcacat ctctctgtca gagagcacaa
1201 atgacactgt tagtccagta atgattagag aatgtgagaa gaatgacagc actgctgatg
1261 agttacatgt aaagcacgaa cctcctgata cagctgtcct tgctcatgaa acacatagag
1321 atagtggatt taagaatgta ggtgacatta ccaataaagc atgtatgatg gacactacag
1381 gtatgtcctg tagtgatcat gtaactgttg atagccctta tgtagttgca gttagaatag
1441 ctgatgagac ctctattaat acacgaagtt tctcaaagtt tgtaggaatg agtgcagatg
1501 caacccctct tcatgtagct agaagtggga atgacactga agatttcagc aacccttctg
1561 cttgctcaga tatttatggt gagagtattt catctcattt tacagagtca acaggaaagt
1621 tgatagagag cttgtcagat tgtgcttcct ccttacctat aaaaaagatt gctggtagta
1681 attataacac ttttttggac tctgaactca gtatgttaaa tgggacaaaa gttctttcag
1741 acagtgccgt gggcattgac ctgggtagta ctggtgatac aacagaagca ttgcacgaac
1801 taagaactgc cgaagagttc aaaacagaag agcaagatgc ctcagggagt atagaatttg
1861 gtgtatcttt tcctgatagg gaatcatcat ctatggaaac atccatcgaa ccaaaagcaa
1921 ctgaaacttc tcacacagag ggaattactg ccattgagga gagctgggag tctatgttta
1981 acgatgatgg tgactgcctg gatccacgtc ttctacaaga gttatcaggg aataccaaga
2041 gcagagagag catccaggaa cctagatctg attactacaa tcatgaagtt cctgatattg
2101 acctcagtga ttgtgaattc ccacatgtca ttgaaattta tgactttccc caagaatttc
2161 gtactgaaga ccttctacgg gttttctgca gttatcaaaa gaaaggattt gatattaaat
2221 gggtggatga tacacatgcc ctaggagtat tctccagtcc aattacagct cgtgatgcgt
2281 tgggtattaa acacaccatg gtgaagattc gtcccttgtc acaggccaca agagcagcca
2341 aggccaaagc tagagcttat gctgagttcc tccagccagc aaaggagcgt cctgagactt
2401 cagcagccct agccagaagg ttagtcatca gtgcccttgg ggttcgaagt aagcagagca
2461 aaaccgaacg agaagcagag ctcaagaaac tgcaagaagc cagagagaga aagcggttgg
2521 aagccaagca acgggaagac atctgggaag gcagagacca gtctacagtt tgaacatcac
2581 tcaatgaaag ggataattcc atgaatcaga aaatgtttcc atagccttca gataagatga
2641 tccttccaga gctctatgta catgcagatg tgcatgttaa agagataaag tgatcgagac
2701 aaggactgac tgggtataga aggaagacag actcctgtct tcactcctaa atgcagttct
2761 ttggaatcac cctactgtgg tgggcgtagt agggagcc
//