LOCUS BC099728 2447 bp mRNA linear HUM 17-JUL-2006 DEFINITION Homo sapiens protocadherin beta 14, mRNA (cDNA clone MGC:120065 IMAGE:40019185), complete cds. ACCESSION BC099728 VERSION BC099728.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2447) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2447) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (15-JUL-2005) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Baylor Human Genome Sequencing Center cDNA Library Preparation: Baylor Human Genome Sequencing Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAM Plate: 4 Row: l Column: 20. FEATURES Location/Qualifiers source 1..2447 /db_xref="H-InvDB:HIT000336108" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:120065 IMAGE:40019185" /tissue_type="PCR rescued clones" /clone_lib="NIH_MGC_283" /note="Vector: pCR-Blunt II-TOPO with reversed insert; Clone identification sequence tag: TAAAGGCG" gene 1..2447 /gene="PCDHB14" /gene_synonym="PCDH-BETA14" /db_xref="GeneID:56122" /db_xref="HGNC:HGNC:8685" /db_xref="MIM:606340" CDS 1..2397 /gene="PCDHB14" /gene_synonym="PCDH-BETA14" /codon_start=1 /product="protocadherin beta 14" /protein_id="AAH99728.1" /db_xref="GeneID:56122" /db_xref="HGNC:HGNC:8685" /db_xref="MIM:606340" /translation="MEIRGALDLRKRQVLIFLVLLGLSRAGTESAHYSVAEETEIGSF VANLARDLGLGVEELSSREARVVSDDNKKYLHLDLLTGNLLLNEKLDRDELCGSTEPC VLHFQVVLENPLQFFRFELCVKDINDHSPTFLDKEILIKISEGTTVGATFLMESAQDL DVGSNSLQNYTISPNSHFYIKIPDSSDRKIYPELVLDRALDYEQEAELRLTLTAVDGG SPPKSGTTLVLIKVLDINDNAPEFPQSLYEVQVPEDRPLGSWIATISAKDLDAGNYGK ISYTFFHASEDIRKTFEINPISGEVNLRSPLDFEVIQSYTINIQATDGGGLSGKCTLL VKVMDINDNPPEVTISSITKRIPENASETLVALFSILDQDSGDNGRMICSIQDNLPFF LKPTFKNFFTLVSEKALDRESQAEYNITITVTDLGTPRLKTEYNITVLLSDVNDNAPT FTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVNYSLLPPQDRHLPLASLVSINA DNGHLFALRSLDYEALQEFEFRVGATDRGSPALSSEALVRVLVLDANDNSPFVLYPLQ NGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATEPGLFGVWAHNGEV RTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQPYLPLPEAAPAQAQ ADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRCSVPEGPFPGHLVDVS GTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNFQVHDTGRNMGEIENFRNSFGLNIQ " BASE COUNT 587 a 656 c 639 g 565 t ORIGIN 1 atggagatca gaggggcact cgatctgcga aaaaggcaag ttctaatatt ccttgttttg 61 ctgggattgt ctcgggcagg tactgaatct gcacactatt ctgtggcaga ggaaacagaa 121 attggctctt ttgtggctaa tctagcgagg gacctagggc tgggggtgga ggagctgtct 181 tcacgtgaag cccgggtagt gtctgatgat aataaaaagt atttgcacct tgatttgctg 241 actgggaatt tgctcctaaa tgagaaacta gaccgagacg agctgtgtgg ctccaccgag 301 ccctgtgtgc tgcattttca ggtggttttg gaaaaccctt tacagttttt tcggtttgag 361 ctgtgtgtca aagacataaa tgatcactcc cctacatttc tagacaagga aatacttatt 421 aaaatatcag aaggtaccac tgttggagct acctttctaa tggagagtgc tcaagatttg 481 gatgtcggaa gcaacagtct ccaaaactac acaattagcc ccaattctca cttctacatt 541 aaaattcccg acagtagtga cagaaagata tacccagagc tggtcctaga tagagcttta 601 gattatgaac aggaagctga actcagatta acactcacag cagtggatgg tggatccccg 661 cccaagtctg ggacaacttt ggttctcatc aaggtgttgg acatcaatga taatgcccct 721 gagtttcctc agagtctcta tgaggtgcaa gtccccgagg acagacccct tggctcctgg 781 attgccacca tctcagctaa ggatctggat gcaggaaact atggaaaaat atcttacaca 841 tttttccatg catcagaaga tattcgtaaa acatttgaaa ttaatccaat atctggggaa 901 gttaatttga gatcacccct ggattttgaa gtaatacagt cctacactat aaatattcag 961 gcaacagatg gtgggggtct ttcaggaaaa tgcacccttc tagttaaagt tatggatata 1021 aacgacaacc caccagaagt gaccatatcg tcgattacaa agagaattcc agagaatgcc 1081 tcagagaccc tagtagctct ttttagtatc ctagaccaag actctggaga caatgggagg 1141 atgatttgct ctattcaaga taacctccct tttttcctga aaccgacctt caagaacttt 1201 ttcactctag tttctgaaaa agcactggac agagagagcc aagccgagta caacatcacg 1261 atcaccgtca cagacttggg gacacccagg ctgaaaaccg agtacaacat aaccgtgctg 1321 ctctctgacg tcaatgacaa cgcccccacc ttcacccaaa cctcctacac cctgttcgtc 1381 cgcgagaaca acagccccgc cctgcacatc ggcagcgtca gcgccacaga cagagactca 1441 ggcaccaacg cccaggtcaa ctactcgctg ctgccgcccc aggaccggca cctgcccctc 1501 gcctccttgg tctccatcaa cgcggacaat ggccacctgt ttgccctcag gtcgctggac 1561 tacgaggccc tacaggagtt cgagtttcgc gtgggcgcca cagaccgcgg gtccccggcg 1621 ttgagcagcg aggcgctggt gcgcgtgctg gtgctggacg ccaacgacaa ctcgcccttc 1681 gtgctgtacc cgctgcagaa cggctccgcg ccctgcaccg agctggtgcc ccgggcggcc 1741 gagccgggct acctggtgac caaggtggtg gcggtggacg gcgactcggg ccagaacgcc 1801 tggctgtcgt accagctgct caaggccacg gagcccgggc tgttcggcgt gtgggcgcac 1861 aatggcgagg tgcgcaccgc caggctgctg agcgagcgcg acgcggccaa gcacaggctg 1921 gtggtgctgg tcaaggacaa tggcgagcct ccgcgctcgg ccaccgccac gctgcacgtg 1981 ctcctggtgg acggcttctc ccagccctac ctgccgctcc ctgaggcggc cccggcccag 2041 gcccaggccg actccctcac cgtctacctg gtggtggcat tggcctcggt gtcgtcgctc 2101 ttcctcttct cggtgctcct gttcgtggcg gtgcggctgt gcaggaggag cagggcggcc 2161 tcggtgggtc gctgctcggt gcccgagggt ccctttccag ggcatctggt ggacgtgagc 2221 ggcaccggga ccctgtccca gagctaccaa tacgaggtgt gtctgacagg aggttccggg 2281 acaaatgagt tcaaatttct gaagccgatt atccccaatt ttcaagttca tgacactggt 2341 aggaatatgg gggaaatcga gaactttcga aatagctttg gacttaacat tcaataaaac 2401 aatttatttt aaatgtctaa tttttggtta ttcttggcaa gctgatg //