LOCUS BC099695 2018 bp mRNA linear HTC 06-OCT-2005
DEFINITION Mus musculus lin-9 homolog (C. elegans), mRNA (cDNA clone
IMAGE:4507547), with apparent retained intron.
ACCESSION BC099695
VERSION BC099695.1
KEYWORDS HTC.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 2018)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2018)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-JUL-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: The Cepko Laboratory
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 208 Row: d Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31340863
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..2018
/organism="Mus musculus"
/mol_type="mRNA"
/db_xref="taxon:10090"
/clone="IMAGE:4507547"
/tissue_type="Eye, retina, mouse strain C57Bl\6"
/clone_lib="NIH_MGC_94"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 611 a 392 c 435 g 580 t
ORIGIN
1 gatggcggag ctcgaccagt tgcctgacga gagctcttca gcaaaagccc ttgtcagttt
61 aaaagaggga agtttatcta acacatggaa tgaaaagtac agttctttac agaaaactcc
121 tgtttggaaa ggcaggaatg cgggccctgc tgtagaaatg cctttcagaa attcaaaaag
181 aagtcgactc ttttctgatg aagatgacag acaaataaat acaaagtcac ctaaaagaaa
241 ccagagagtg gcaatgatcc cacagaaatt tacagcaacg atgtcaacac cagataagaa
301 agcatcacag aagattggtt ttcgattacg gaacctactc aagcttccca aagcacataa
361 gtggtgcata tatgagtggt tctactcaaa catagacaag ccactttttg aaggagataa
421 tgacttttgt gtatgcctaa aggaatcctt tcctaatttg aaaacaagaa aattaacaag
481 agtagaatgg ggaaaaatca ggagactgat gggaaaacct cggagatgtt cttctgcatt
541 ttttgaggaa gagagatcag ccttaaaaca gaagcggcag aaaatcaggc tgttacaaca
601 aaggaaagtt gcagatgttt cacagttcaa agatctcccc gatgaaatcc ctctacccct
661 ggttattgga accaaagtta cagcgcggtt acgtggcatt cacgatggcc tgtttactgg
721 tcagatagat gcagtggaca ctcttaatgc tacttacaga gtaactttcg ataggacagg
781 ccttgggact cacaccattc ctgactatga agttcttagt aatgagcctc atgagacaat
841 gccaatctct gcctttggac aaaaacagcg gccttctcgg ttttttatga cccccccacg
901 gttacattat acccctcctc tccagtcacc aattacagat ggcgatcctt tactggggca
961 gtcaccttgg agaagtaaag tttctggctc tgacacggag acgttaggag gctttccagt
1021 ggaattcctt atccaggtga ctaagttatc aaaaattctc atgattaaaa aagagcatat
1081 aaagaaatta agggagatga acacagaagc agaaaagctg gtaaggactt aaggatttat
1141 ctccttttgt ttacttgttt aattttaaaa tggtgaggcc ttctgatttt ttttttttta
1201 atactttctg gggaaaaaac ctttgaagct tgtttgtttg tttttacttg ggatcaggtc
1261 ttgcagtgtc cctggctggt cggaagtgaa ttgtatagac caggctggct tccaacttct
1321 gacagtcatc cttcgtttgc ctcctggtgc tgggaccaca ggcttgtgcc accacatgtg
1381 gttgcaataa atatgacttt agatcattat tttattttac cttttcttag tatattgaat
1441 ccatgctact aattcagcag tggatagacg acctcaccca ttagactgac agcaccgctg
1501 cgtaggataa cggatggctt agcttcacgg gtcatttcta tgagcataga attcctaaga
1561 ctagtacatc tcactaagga catttgaatg acaggttttt aaagggcttc agaataaggt
1621 actaatgttg tcatagttaa gttaacttga cgagagttta ttattcaggg aggtccaaaa
1681 aaactgagtc tgttttattt gtaagaaaga actagtggaa gtttcaggtt tttaaagatt
1741 cgttttattt atatgtctgt gtctgtgtga atatatgcta tatacataca tataggtacg
1801 cctggaagag ccatgtgtac tcttagttgc tgagccatct ctctatcccc tttgaaactg
1861 tttatcattc tttaaaagta actctcgcct ttaatcccag ctcttgggag gcagtgacag
1921 gtggatttct gagtttgagg ccaacctggt ctacagagtg agttctagga cagccagggc
1981 tacacagaga aaccctgtct cggaaaaaaa aaaaaaaa
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