LOCUS BC099211 1224 bp mRNA linear ROD 24-APR-2006
DEFINITION Rattus norvegicus activating signal cointegrator 1 complex subunit
3-like 1, mRNA (cDNA clone IMAGE:7384540), complete cds.
ACCESSION BC099211
VERSION BC099211.1
KEYWORDS .
SOURCE Rattus norvegicus (Norway rat)
ORGANISM Rattus norvegicus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Rattus.
REFERENCE 1 (bases 1 to 1224)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1224)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-JUL-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Drs. Josef Lazar & Howard Jacob, Medical
College of Wisconsin
cDNA Library Preparation: Open Biosystems
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 231 Row: f Column: 15
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1224
/organism="Rattus norvegicus"
/mol_type="mRNA"
/db_xref="taxon:10116"
/clone="IMAGE:7384540"
/tissue_type="Thymus, rat"
/clone_lib="NIH_MGC_250"
/lab_host="DH10B"
/note="Vector: pExpress1"
gene 1..1224
/gene="Ascc3l1"
/db_xref="GeneID:296126"
/db_xref="RGD:1561120"
CDS 489..944
/gene="Ascc3l1"
/codon_start=1
/product="Ascc3l1 protein"
/protein_id="AAH99211.1"
/db_xref="GeneID:296126"
/db_xref="RGD:1561120"
/translation="MEMEDEERNALLQLTDSQIADVARFCNRYPNIELSYEVVDKDSI
RSGGPVVVLVQLEREEEVTGPVIAPLFPQKREEGWWVVIGDAKSNSLISIKRLTLQQK
AKVKLDFVAPATGGHNYTLYFMSDAYMGCDQEYKFSVDVKEAETDSDSD"
BASE COUNT 309 a 284 c 336 g 295 t
ORIGIN
1 ccttcttcat gcaggcaatc cggctcattc aggcctgtgt ggatgtactc tccagcaatg
61 ggtggcttag ccctgctctg gcagccatgg aactggctca gatggtcacc caagccatgt
121 ggtctaagga ctcttacctg aagcagctgc cacacttcac ctcagagcat atcaaacgtt
181 gcacagataa ggtgagctga gacctggggt gctgggtgac gagcttgaga acattggtcc
241 tgatctgcag gtggattgtg ggagcaaacg ttagcaggaa aaactggttc ctttgaagga
301 gttccatctg aatcgaaatg ctgggaggtg ccagacgtgg tctgcattct ttctgaggct
361 aacactggca gtgtggggcg tgagatgagc agttctttgg agctagtgtt gcttgcttgt
421 ggcctgtatt ctctgctccc ctaacctctg catacccacg gtagggagtg gagagtgttt
481 ttgacatcat ggagatggag gatgaagaac ggaatgcatt gcttcagttg actgacagcc
541 agattgcaga tgtggcccgc ttctgtaacc gctacccgaa tatcgaactg tcctatgaag
601 tggtggataa agacagcatc cgcagtggcg ggccagtcgt ggtgctggtg caactagagc
661 gagaggagga agtcaccggc cctgttattg cacctctctt cccacagaaa cgtgaagagg
721 gctggtgggt tgtgattgga gacgccaagt ccaacagcct catctccatc aagaggctga
781 ccttgcagca gaaagccaag gtgaagctgg actttgtggc cccagccaca ggcggccaca
841 actataccct gtacttcatg agtgacgctt acatggggtg tgaccaggag tataaattca
901 gcgtggacgt gaaagaagct gagacagaca gtgactcaga ttgagtctga ggcatcaaac
961 ctgagaacac ggatctggac agccccgggg atctggtttt agagaccaga tctgtcagcc
1021 tgaggtctgg ccatcaggct gctgctgttc ccagtccaca tccagttgct ctcccacctt
1081 gaccttgcag ttcaaggtct gcatccagta ttttcaagtg tctcatcaaa cacgaactgt
1141 acaatatttg gaggcatgtt ttttagttcc ttgagtcaga cattctaata aataatttgg
1201 aaaaaaaaaa aaaaaaaaaa aaaa
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