LOCUS BC098568 3812 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens chromosome 14 open reading frame 102, mRNA (cDNA clone
MGC:111380 IMAGE:30706812), complete cds.
ACCESSION BC098568
VERSION BC098568.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3812)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3812)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-JUL-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: James Martin, University of Iowa
cDNA Library Preparation: M. Bento Soares, University of Iowa
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 222 Row: b Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 39932582.
FEATURES Location/Qualifiers
source 1..3812
/db_xref="H-InvDB:HIT000336019"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:111380 IMAGE:30706812"
/tissue_type="Chondrosarcoma, myxoid chondrosarcoma Grade
II, mixture of 3 cell lines, enriched for 3-4 Kb mRNA"
/clone_lib="NIH_MGC_220"
/lab_host="DH10B"
/note="Vector: pYX-ASC"
gene 1..3812
/gene="C14orf102"
/gene_synonym="FLJ10008"
/gene_synonym="FLJ14051"
/db_xref="GeneID:55051"
/db_xref="HGNC:HGNC:20186"
CDS 12..3506
/gene="C14orf102"
/gene_synonym="FLJ10008"
/gene_synonym="FLJ14051"
/codon_start=1
/product="chromosome 14 open reading frame 102"
/protein_id="AAH98568.1"
/db_xref="GeneID:55051"
/db_xref="HGNC:HGNC:20186"
/translation="MALFPAFAGLSEAPDGGSSRKELDWLSNPSFCVGSITSLSQQTE
AAPAHVSEGLPLTRSHLKSESSDESDTNKKLKQTSRKKKKEKKKKRKHQHHKKTKRKH
GPSSSSRSETDTDSEKDKPSRGVGGSKKESEEPNQGNNAAADTGHRFVWLEDIQAVTG
ETFRTDKKPDPANWEYKSLYRGDIARYKRKGDSCLGINPKKQCISWEGTSTEKKHSRK
QVERYFTKKSVGLMNIDGVAISSKTEPPSSEPISFIPVKDLEDAAPVTTWLNPLGIYD
QSTTHWLQGQGPPEQESKQPDAQPDSESAALKAKVEEFNRRVRENPRDTQLWMAFVAF
QDEVMKSPGLYAIEEGEQEKRKRSLKLILEKKLAILERAIESNQSSVDLKLAKLKLCT
EFWEPSTLVKEWQKLIFLHPNNTALWQKYLLFCQSQFSTFSISKIHSLYGKCLSTLSA
VKDGSILSHPALPGTEEAMFALFLQQCHFLRQAGHSEKAISLFQAMVDFTFFKPDSVK
DLPTKGQVEFFEPFWDSGEPRAGEKGARGWKAWMHQQERGGWVVINPDEDDDEPEEDD
QEIKDKTLPRWQIWLAAERSRDQRHWRPWRPDKTKKQTEEDCEDPERQVLFDDIGQSL
IRLSSHDLQFQLVEAFLQFLGVPSGFTPPASCLYLAMDENSIFDNGLYDEKPLTFFNP
LFSGASCVGRMDRLGYPRWTRGQNREGEEFIRNVFHLVMPLFSGKEKSQLCFSWLQYE
IAKVIWCLHTKNKKRLKSQGKNCKKLAKNLLKEPENCNNFCLWKQYAHLEWLLGNTED
ARKVFDTALGMAGSRELKDSDLCELSLLYAELEVELSPEVRRAATARAVHILTKLTES
SPYGPYTGQVLAVHILKARKAYEHALQDCLGDSCVSNPAPTDSCSRLISLAKCFMLFQ
YLTIGIDAAVQIYEQVFAKLNSSVFPEGSGEGDSASSQSWTSVLEAITLMHTSLLRFH
MKVSVYPLAPLREALSQALKLYPGNQVLWRSYVQIQNKSHSASKTRRFFDTITRSAKP
LEPWLFAIEAEKLRKRLVETVQRLDGREIHATIPETGLMHRIQALFENAMRSDSGSQC
PLLWRMYLNFLVSLGNKERSKGVFYKALQSCPWAKVLYLDAVEYFPDEMQEILDLMTE
KELRVRLPLEELELLLED"
BASE COUNT 1052 a 852 c 1037 g 871 t
ORIGIN
1 ggcctgtggt catggcgctg ttcccagcct ttgcggggct tagtgaggct cccgatggcg
61 ggagctccag gaaagagtta gactggctga gcaacccaag cttttgtgtt ggatccataa
121 cgtccctgag ccaacaaact gaagcagctc cagcccatgt ttctgaaggg ttaccgctga
181 caaggagtca tctgaaatca gagtcttcag atgaaagtga cactaacaaa aagctcaaac
241 aaacaagtag aaaaaagaag aaagagaaaa agaaaaaaag gaagcatcag catcataaga
301 aaacaaagag gaagcatggg ccgtcgagta gcagcaggtc tgagacagac accgattctg
361 aaaaggacaa accttccaga ggcgttggag gcagtaaaaa ggaatctgag gaaccgaatc
421 aaggaaataa tgctgcagct gatactggac atcgctttgt ttggcttgag gacattcagg
481 ctgtgacggg agaaaccttc agaacagata agaaaccaga tcctgcgaac tgggagtaca
541 agtctctcta ccgaggggat atagcaagat acaagaggaa aggagactcc tgccttggca
601 ttaaccctaa gaagcagtgc atatcttggg aagggacttc cacagagaag aagcattcac
661 gcaagcaggt tgaacgctat tttactaaga agagtgtggg attaatgaac atcgatggag
721 ttgccattag cagtaaaact gaacctccct catctgagcc catctccttt ataccagtga
781 aggacttgga agatgcggct cctgttacaa cctggttgaa tcctctgggg atttatgatc
841 agtcaaccac acattggcta caaggacagg gtcctccaga gcaggaatca aagcagccag
901 acgcacagcc agacagcgag agtgcggctc tcaaggccaa ggtggaggag tttaacagga
961 gggtgcggga gaatcctcgg gatacgcagc tgtggatggc atttgttgct tttcaggacg
1021 aggtcatgaa aagtcctggc ctgtatgcca tcgaggaagg agagcaggaa aagcgaaaga
1081 ggtccctgaa gctcattctg gagaagaagc tggccattct ggagcgggcc attgagagca
1141 accagagcag tgtggatctg aaactggcca agctgaagct ctgcacagag ttctgggagc
1201 cctccactct ggtcaaagag tggcagaaac tgatattttt gcatcccaat aatacagccc
1261 tttggcagaa atacctttta ttttgccaga gccagtttag taccttttcg atatcaaaaa
1321 ttcacagtct ttatggaaaa tgcttgagca ctttgtctgc tgttaaggac ggcagcatct
1381 tatctcaccc tgcgttgcct ggcacggaag aggccatgtt tgcactcttt cttcagcagt
1441 gccactttct gcggcaggct ggccactctg agaaggccat ctcattgttc caggccatgg
1501 tggacttcac cttcttcaaa cccgacagcg taaaagatct gcctaccaaa ggacaggtgg
1561 aattctttga acccttttgg gacagtggag agccccgggc tggggagaag ggagcccgag
1621 gctggaaggc gtggatgcac cagcaggaac gaggtggctg ggtggtcatc aacccagatg
1681 aggatgacga tgaaccagaa gaggatgacc aggaaataaa agataagact ctgcccaggt
1741 ggcagatctg gcttgctgct gagcgttccc gtgaccagag gcactggcgg ccctggcgcc
1801 ctgataagac caagaagcaa accgaggaag actgtgagga tcccgagaga caggtgttgt
1861 ttgatgatat tgggcaatct ttgatcagac tttccagcca tgatcttcag ttccagctgg
1921 tggaggcctt cctgcagttc ttgggtgtgc cttctggctt tactcctcca gcctcctgtc
1981 tttatctggc catggatgag aacagcatct ttgataatgg actttatgat gaaaagccct
2041 tgactttttt caaccctttg ttttctgggg ctagctgtgt tggccgcatg gataggttgg
2101 gctatcctcg ctggaccagg ggtcagaacc gagagggcga ggagttcatc cgcaatgtct
2161 tccaccttgt catgccttta ttttcaggca aagagaagtc ccagctctgc ttctcctggt
2221 tacagtatga gattgcaaag gtcatttggt gcctgcacac taaaaacaag aagagattaa
2281 agtctcaagg gaagaactgc aaaaaactag ccaagaatct ccttaaggag ccagaaaact
2341 gcaacaattt ttgcctgtgg aagcagtatg cacatctgga gtggttgctt ggcaacacgg
2401 aggatgccag aaaagttttt gacacagcac ttggcatggc aggaagcaga gaactgaaag
2461 actctgacct ctgtgagctc agtctgctct atgctgagct ggaggtggag ctgtcgccag
2521 aagtgagaag ggctgccaca gctcgagctg ttcacatatt aaccaagctg actgagagca
2581 gcccctatgg gccctacact ggacaggtgt tggctgttca cattttgaaa gcgcgaaagg
2641 cttatgagca cgcactgcag gactgtttgg gtgacagctg tgtctccaat ccagctccca
2701 ccgattcctg tagccgccta attagcctgg ctaaatgctt catgctcttc cagtatttga
2761 ccatagggat tgatgctgct gtgcagatat acgaacaggt gtttgcaaaa ctgaacagtt
2821 ctgttttccc agaaggctct ggcgaggggg acagtgccag ctcccagagt tggaccagtg
2881 ttctcgaagc catcacactg atgcacacga gcctgctgag attccacatg aaagtgagtg
2941 tttacccgct ggcccctctg cgagaggcac tctcacaggc tttaaagttg tatccaggca
3001 accaggttct ttggaggtcc tatgtacaga ttcagaataa gtcccacagt gccagcaaaa
3061 ccaggagatt ttttgacaca atcaccaggt ctgccaaacc cttggagcct tggttgtttg
3121 caattgaagc tgagaaactg aggaagagac tggtggaaac tgtccagagg ttagacggta
3181 gagagatcca cgccacaatt cctgagaccg gcttaatgca tcggatccaa gccctgtttg
3241 aaaatgccat gcgcagcgac agtggcagcc agtgcccctt gctgtggagg atgtatttga
3301 actttctggt ttccttagga aataaagaaa gaagcaaagg tgtattctac aaagcacttc
3361 agagttgccc ttgggcaaag gtgttgtacc tggacgccgt ggagtatttc cccgatgaga
3421 tgcaggagat cctggacctg atgactgaga aggagctccg ggtgcgcctg ccgctggagg
3481 agctggagct gctgctggag gattagagag cagtgggaaa acgggctgtg cctgcgaggc
3541 caagttgccc accctgcgga gctaggaggc gcgagcagag aacgtgtgtg ttaggagaac
3601 tcggcttttg aaatgttctt tctcgatagt aataatgtgg gctgccagcc tctcacatct
3661 tgcacacttt ttgggtgtgt aaatgacaca aaagttattt acatattata tatgtgaata
3721 tgtgtatata tgtacatagc cagagagtca tgccacgtgg tcattaaacc gatgatgatt
3781 gaggaaaaaa aaaaaaaaaa aaaaaaaaaa aa
//