LOCUS       BC098447                1987 bp    mRNA    linear   HTC 26-JUN-2007
DEFINITION  Homo sapiens protein tyrosine phosphatase, receptor type, J, mRNA
            (cDNA clone IMAGE:5556937), with apparent retained intron.
ACCESSION   BC098447
VERSION     BC098447.1
KEYWORDS    HTC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1987)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1987)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (01-JUL-2005) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: DCTD/DTP
            cDNA Library Preparation: Rubin Laboratory
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Sequencing Group at the Stanford Human Genome
            Center, Stanford University School of Medicine, Stanford, CA  94305
            Web site:       http://www-shgc.stanford.edu
            Contact:  (Dickson, Mark) mcd@paxil.stanford.edu
            Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
            R. M.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAL Plate: 62 Row: d Column: 24
            This clone has the following problem: retained intron.
FEATURES             Location/Qualifiers
     source          1..1987
                     /db_xref="H-InvDB:HIT000336001"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="IMAGE:5556937"
                     /tissue_type="Skin, melanoma, melanotic"
                     /clone_lib="NIH_MGC_112"
                     /lab_host="DH10B-R"
                     /note="Vector: pOTB7"
BASE COUNT          582 a          410 c          437 g          558 t
ORIGIN      
        1 cttgggcaca gaaggtggct tggatgccag caatacagag agaagccggg cagggagccc
       61 caccgcccct gtgcatgatg agtccctcgt gggacctgtg gacccatcct ccggccagca
      121 gtcccgagac acggaagtcc tgcttgtcgg gttagagcct ggcacccgat acaatgccac
      181 cgtttattcc caagcagcga atggcacaga aggacagccc caggccatag agttcaggac
      241 aaatgctatt caggtttttg acgtcaccgc tgtgaacatc agtgccacaa gcctgaccct
      301 gatctggaaa gtcagcgata acgagtcgtc atctaactat acctacaaga tacatgtggc
      361 gggggagaca gattcttcca atctcaacgt cagtgagcct cgcgctgtca tccccggact
      421 ccgctccagc accttctaca acatcacagt gtgtcctgtc ctaggtgaca tcgagggcac
      481 gccgggcttc ctccaagtgc acaccccccc tgttccagtt tctgacttcc gagtgacagt
      541 ggtcagcacg acggagatcg gcttagcatg gagcagccat gatgcagaat catttcagat
      601 gcatatcaca caggagggag ctggcaattc tcgggtagaa ataaccacca accaaagtat
      661 tatcattggt ggcttgttcc ctggaaccaa gtattgcttt gaaatagttc caaaaggacc
      721 aaatgggact gaaggggcat ctcggacagt ttgcaataga actggatgat ttgaacacct
      781 gcctggaatt ccatcatctg aaacagagtt ggcagataag aatggcccct atgccaaatt
      841 tggctcattg tctgtttttg taaataaagt tttattggat cacagccatg ttcatttgct
      901 tatgtactgt ctatggctac tttggtgcta gaattgagta gtggcagcag agaacgtgtg
      961 gcttgtgaag cctgagatat ttattttctg gccattacag agaatgtttg ctgacctctg
     1021 ggctagatca gtggttttca aattgtggtc cagggctctc tagggatccc taggttcttt
     1081 caaggggtct ccaaggtagt attatcataa caatactaaa atgttatttg gctttttcat
     1141 tctcattctc ttttggagtt ttccaacttt gatccgatat gggatgacat tgtctctcag
     1201 gtctaatgga atatatgctg tggattctta cattttaaaa atttcttcat tttaaatccc
     1261 tgatatagta aatattaata aatataacct atgtaaatac aaattctctg agagccttaa
     1321 taacttttaa gatggtaaag aagtcctgag agcaaaaagt ttaagaacct ctggtcaaga
     1381 tgtgttagaa attaactact gtgctgtgtt gggcaggtgg actgttcaca gtctttccta
     1441 aacaacactg tgatgagata ctttgttagt tctagaaggc taattgaaat tgataaaatc
     1501 attttatagt cagctacggt ggcctgcacc catcgtccca gctacttgag aggctgcggc
     1561 aggaggattg cttggcccaa cagttgcaga ctagcaccag cctgggagac cctgtctcaa
     1621 aaaaaaattt ttttttatag aaacagttta aattattaaa ttatttctag gcctacagga
     1681 gaaacttctg ggaaatccta gagagtaatg ttcattattg ttgttttaaa attttgaaat
     1741 aattgttttt tggaaaggtt gaaaaacata cagtcttcct tgatctaaga ttcaagatag
     1801 ttgaaatctt ttatacagag ggtagaataa agatatacct aatgtaaatg atgagttaat
     1861 gggtgcagca caccaacatg gcacatgtat acatatgtaa caaacctgca cgttgtgcac
     1921 atgtacccta gaacttaaag tataataaaa acatatatat atatataaaa aaaaaaaaaa
     1981 aaaaaaa
//