LOCUS BC098406 4592 bp mRNA linear HUM 21-JUL-2006
DEFINITION Homo sapiens RAN binding protein 6, mRNA (cDNA clone MGC:104721
IMAGE:30347107), complete cds.
ACCESSION BC098406
VERSION BC098406.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4592)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4592)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-JUL-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Stefan Hansson
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 198 Row: k Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 52486449.
FEATURES Location/Qualifiers
source 1..4592
/db_xref="H-InvDB:HIT000335960"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:104721 IMAGE:30347107"
/tissue_type="Placenta, normal"
/clone_lib="NIH_MGC_147"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..4592
/gene="RANBP6"
/db_xref="GeneID:26953"
/db_xref="HGNC:HGNC:9851"
CDS 9..3326
/gene="RANBP6"
/codon_start=1
/product="RAN binding protein 6"
/protein_id="AAH98406.1"
/db_xref="GeneID:26953"
/db_xref="HGNC:HGNC:9851"
/translation="MAATASAGVPATVSEKQEFYQLLKNLINPSCMVRRQAEEIYENI
PGLCKTTFLLDAVRNRRAGYEVRQMAAALLRRLLSSGFEEVYPNLPADVQRDVKIELI
LAVKLETHASMRKKLCDIFAVLARNLIDEDGTNHWPEGLKFLIDSIYSKNVVLWEVAL
HVFWHFPGIFGTQERHDLDIIKRLLDQCIQDQEHPAIRTLSARAAAAFVLANENNIAL
FKDFADLLPGILQAVNDSCYQDDDSVLESLVEIADTVPKYLGPYLEDTLQLSLKLCGD
SRLSNLQRQLALEVIVTLSETATPMLKKHTNIIAQAVPHILAMMVDLQDDEDWVNADE
MEEDDFDSNAVAAESALDRLACGLGGKVVLPMTKEHIMQMLQSPDWKYRHAGLMALSA
IGEGCHQQMESILDETVNSVLLFLQDPHPRVRAAACTTLGQMATDFAPNFQKKFHETV
IAALLRTMENQGNQRVQSHAASALIIFIEDCPKSLLVLYVDSMVKNLHSVLVIKLQEL
IRNGTKLALEQLVTTIASVADTIEEKFVPYYDIFMPSLKHIVELAVQKELKLLRGKTI
ECISHIGLAVGKEKFMQDASNVMQLLLKTQSDLNNMEDDDPQTSYMVSAWARMCKILG
KDFQQYLPLVIEPLIKTASAKPDVALLDTQDVENMSDDDGWQFVNLGDQQSFGIKTSG
LEAKATACQMLVYYAKELREGFVEYTEQVVKLMVPLLKFYFHDNVRVAAAESMPFLLE
CARIRGPEYLAQMWQFICDPLIKAIGTEPDTDVLSEIMNSFAKSIEVMGDGCLNDEHL
EELGGILKAKLEGHFKNQELRQVKRQEENYDQQVEMSLQDEDECDVYILTKVSDILHS
LFSTYKEKILPWFEQLLPLIVNLICSSRPWPDRQWGLCIFDDIIEHCSPTSFKYVEYF
RWPMLLNMRDNNPEVRQAAAYGLGVMAQFGGDDYRSLCSEAVPLLVKVIKCANSKTKK
NVIATENCISAIGKILKFKPNCVNVDEVLPHWLSWLPLHEDKEEAIQTLSFLCDLIES
NHPVVIGPNNSNLPKIISIIAEGKINETINYEDPCAKRLANVVRQVQTSEDLWLECVS
QLDDEQQEALQELLNFA"
BASE COUNT 1410 a 777 c 1009 g 1396 t
ORIGIN
1 tgagcgcaat ggcggcaacc gcgtctgcag gggtgccggc gaccgtgtca gaaaagcaag
61 agttttacca gcttctgaag aacctgatca atccaagctg tatggtgcgg aggcaagcag
121 aggaaatcta tgaaaatatc ccaggtctgt gtaagactac cttcctctta gatgccgtca
181 gaaatagaag agcaggttat gaggtgagac aaatggctgc cgcactgcta cgacggcttt
241 tgtcctctgg gtttgaggag gtttatccaa atctgcctgc tgatgttcag agagatgtca
301 agattgaact gattctggct gttaagttag aaacacatgc tagcatgagg aaaaaacttt
361 gtgatatttt tgcagtgctg gccaggaatt tgatagatga ggatggcact aaccactggc
421 cggaaggtct gaagtttctt attgattcaa tctactccaa aaatgtggtt ctatgggaag
481 ttgcacttca cgttttctgg cactttcctg ggatttttgg gacccaagag cggcatgatt
541 tggatatcat caaacggttg ttggaccagt gtattcaaga tcaagaacat ccagcaatca
601 ggacattatc cgctagagct gcagctgcat ttgtacttgc taatgagaat aatattgctc
661 ttttcaaaga ctttgcagac ttgcttcctg gaatcttaca ggctgtgaat gactcatgct
721 accaggatga tgattcagtg ctagaatccc ttgttgagat tgcagatacc gtacctaagt
781 acttgggtcc ttatttagaa gatactctac agttgagttt gaagttatgt ggagactcta
841 ggcttagtaa tctgcagcgc cagctggccc tcgaagttat agtgaccttg tctgaaactg
901 ccactccgat gttgaaaaaa catacaaata ttattgcaca ggcagttcct catatattag
961 caatgatggt tgatctacaa gatgatgagg actgggtaaa tgctgatgaa atggaagaag
1021 atgattttga cagcaatgca gttgctgcgg agagtgcact agacagactg gcttgtgggc
1081 ttggtggaaa agttgtttta ccaatgacca aggagcatat catgcagatg cttcagagcc
1141 ctgactggaa gtatcgacat gctggattaa tggccttatc tgccattgga gaaggatgcc
1201 atcaacaaat ggaatcaatt ctagatgaaa cagttaactc cgttttgctt tttcttcagg
1261 atcctcatcc aagggtgagg gctgcagcct gtactacact tggacagatg gctacagatt
1321 ttgcacctaa tttccaaaag aaatttcatg aaacagtgat tgcagctctg ttacgtacca
1381 tggaaaatca aggtaatcag cgtgtgcaat cacatgcagc ttctgctctt attattttta
1441 ttgaagactg ccctaaatca ttgctagttc tatatgtgga tagtatggtg aaaaatctac
1501 attccgtctt ggtgattaaa cttcaagagt tgattcggaa tggaactaag ttggctttgg
1561 aacaacttgt gacaaccatt gcatcagttg cagatacaat agaagaaaaa tttgtcccat
1621 attatgatat attcatgccc tcactaaagc acattgttga gcttgctgtt cagaaggaac
1681 tcaagcttct gagaggaaaa actatcgagt gcattagcca tattggtctt gctgttggga
1741 aggaaaaatt tatgcaagat gcatcaaatg tgatgcagct gttgttgaag acacaatcag
1801 acttaaataa tatggaagat gatgaccctc agacctctta catggtttca gcatgggcta
1861 gaatgtgtaa aattcttgga aaagattttc aacagtacct tccactggtt atcgagcctc
1921 ttattaagac tgcttcagct aaacctgatg ttgctctctt agacacacag gatgtggaaa
1981 atatgagtga cgatgatggc tggcaatttg taaatcttgg agaccagcag agttttggaa
2041 ttaaaacttc aggacttgaa gcaaaagcaa ctgcttgcca aatgttggtt tactatgcta
2101 aggagttaag ggaagggttt gtggaatata cagaacaagt tgtgaagctg atggttcctt
2161 tactgaaatt ttatttccat gacaatgttc gagtggcagc agcagagtcc atgccttttc
2221 tcctggaatg tgcaagaatt cgtggcccag agtatcttgc acagatgtgg caattcatat
2281 gtgacccctt aatcaaggct attggtactg aaccagatac agatgtgctc tcagaaataa
2341 tgaattcttt tgcaaagtcc attgaagtta tgggagatgg ttgccttaat gatgaacact
2401 tggaagaact gggaggaata ctgaaagcaa aacttgaagg gcactttaaa aaccaagaat
2461 tgagacaggt gaaaagacag gaagaaaact atgatcaaca ggttgagatg tctctgcaag
2521 atgaggatga atgtgatgtt tatattctga ccaaagtatc agatattttg cactcattat
2581 ttagtactta taaggaaaag attttaccat ggtttgaaca actacttcca ttaattgtaa
2641 atctaatttg ttcaagtagg ccatggccag acagacagtg gggattgtgc atatttgatg
2701 acatcataga gcactgcagt ccaacttcat ttaaatatgt agaatatttt cggtggccaa
2761 tgctactaaa tatgcgagat aacaaccctg aagtcaggca agctgctgct tatggcctgg
2821 gtgtcatggc acagtttggt ggagatgatt atcgttcttt atgttcagaa gctgttccac
2881 ttctggtaaa agttattaag tgtgcaaatt ccaaaaccaa aaaaaatgtc attgctacag
2941 agaactgtat ctcagcaata gggaagattt tgaagtttaa gcctaactgt gtaaatgtag
3001 atgaagttct tccacactgg ttatcatggc ttccactgca tgaagataaa gaggaagcta
3061 ttcagacttt gagttttctc tgtgacctaa ttgaaagtaa ccacccagtt gtaattggtc
3121 caaataattc caatcttccc aaaataatca gtataattgc agaaggaaaa attaatgaga
3181 ctattaacta tgaggatcct tgtgccaaac gcctagctaa tgtcgtgcgt caggtacaga
3241 cttctgaaga tttatggttg gaatgtgtat cacaacttga tgatgaacag caggaagcct
3301 tacaggagtt gctaaatttt gcttgaagca ctttaatata acttgaatat tatctattat
3361 aaaagtaact acaaataagt gttgtgaata gatttattat aaatcagaga actgttttct
3421 ccctgctaag cagtttatag ttcttctcca tgtttctcca gaattaatca gtgttagtcc
3481 tctgtttatc tcgcatgttt tatcttccaa acacagacct tggtgataac ctgtgcttca
3541 aactgtctta aacaatgttt gtcacctttc ccctagttga tgtaaagtat ataaattgtt
3601 gctatttgtt tgaactatta ttgatgctag ccaagcagta tacttgatgt gaagatgtca
3661 tgctatcaca atatgctaag agctcacaaa aataagatag aatttccagg acaaacatct
3721 ttggaattgt gagtgaagga tatagtggca ggcttgtccc tctttaatta atactcttgg
3781 tatttgtggt gatgggagga tgctgttact aggagagttt tgagatactg cagtggatgt
3841 gggatgtata tgaacttctt cataatgtac tcctgggaac tgggtaggac atatccatat
3901 tgtagttccc aaggtgtctg gttgagagtt agagaacttt taaatttctt tagccagaca
3961 ggtctctatt tttttaagtt atccaggact ccaagaacca tagttactga aaagggagtc
4021 ctgatacatc taatattggt agcatgtaac agtgtttgac aaagagtaag taagcagtat
4081 tcttgggagt cagtgttatg tgtttcagca gagtattatt ttgtatatgt atgccatttt
4141 ctccctgcaa agcagctcaa caagagaaaa agctctagtt atagggctta aattgatttc
4201 tatttcaaat aatttcctaa gagattctag agtagaactg aagagtattc tattggaaaa
4261 gtgaaaggaa agaaatgtaa ttttctttga acatgaaaaa gaaaacaact ttgagagtag
4321 tcatttagca gtagatgtgc attattatga gaaaacagtt ctataagtcc agggttaatt
4381 atattaattg gaatgtcagt ctttaatgtc gagcttattg tagggtagaa aagagctttc
4441 tactcagcta acgattactc attgatccaa aacttaaata catctataat ttcctggggc
4501 tattgtgagt actgtgtatg tatttagcaa atatttaaga cctagtaagt gctcaataaa
4561 ttgtagctgt tattgcaaaa aaaaaaaaaa aa
//