LOCUS BC098401 3043 bp mRNA linear HUM 03-AUG-2005
DEFINITION Homo sapiens neuronal cell adhesion molecule, mRNA (cDNA clone
MGC:104689 IMAGE:30528526), complete cds.
ACCESSION BC098401
VERSION BC098401.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3043)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3043)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-JUL-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Stefan Hansson
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 198 Row: n Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 41281388.
FEATURES Location/Qualifiers
source 1..3043
/db_xref="H-InvDB:HIT000335955"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:104689 IMAGE:30528526"
/tissue_type="Placenta, normal"
/clone_lib="NIH_MGC_147"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3043
/gene="NRCAM"
/gene_synonym="KIAA0343"
/db_xref="GeneID:4897"
/db_xref="MIM:601581"
CDS 475..2790
/gene="NRCAM"
/gene_synonym="KIAA0343"
/codon_start=1
/product="NRCAM protein"
/protein_id="AAH98401.1"
/db_xref="GeneID:4897"
/db_xref="MIM:601581"
/translation="MQLKIMPKKKRLSAGRVPLILFLCQMISALEVPLDLVQPPTITQ
QSPKDYIIDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKPGTGTLIINI
MSEGKAETYEGVYQCTARNERGAAVSNNIVVRPSRSPLWTKEKLEPITLQSGQSLVLP
CRPPIGLPPPIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNH
TQTIQQKQPISVKVISVDELNDTIAANLSDTEFYGAKSSRERPPTFLTPEGNASNKEE
LRGNVLSLECIAEGLPTPIIYWAKEDGMLPKNRTVYKNFEKTLQIIHVSEADSGNYQC
IAKNALGAIHHTISVRVKAAPYWITAPQNLVLSPGEDGTLICRANGNPKPRISWLTNG
VPIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRI
LTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSALHEDIYVLHENGTLEIPV
AQKDSTGTYTCVARNKLGMAKNEVHLEIKDATWIVKQPEYAVVQRGSMVSFECKVKHD
HTLSLTVLWLKDNRELPSDERFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAV
LSVVDVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQT
EVSGTQTTAQLKLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGL
GSEPDNLVITWKPLNGFESNGPGLQTSTASF"
BASE COUNT 946 a 660 c 698 g 739 t
ORIGIN
1 agacgcgcgg gcgcggggga cggcgcaggg gccgcctggc tggagcagcc agaggggata
61 gcttcgtcga gaacggagga caccggcggt ccagggtcct gggcagtcgc gccagagctg
121 agcggagggc gcggcgcgag aacgaatctt tgtgacattc tctctcagca ttctttatcc
181 cctgtttgct gaagacttcg accaaagctg gtcttagctg ttggcattct cctgagaaaa
241 ggatagcttc agaaatcaga aaaacatttg ggaggtgtct agcccagtgg accttctgaa
301 gagcaatgct aagaagacgt ttggtttaaa gaattaaaag gaagaacaac ttaagagctt
361 cttcaaagtt tcccgcatga aaattactta aacgttgcac acaacgtttc acaaaatctt
421 ttgtgaaaga agaaaaggaa attcagtgtg tgagtctcag caggagttaa gctaatgcag
481 cttaaaataa tgccgaaaaa gaagcgctta tctgcgggca gagtgcccct gattctcttc
541 ctgtgccaga tgattagtgc actggaagta cctcttgatc tggtacagcc tccaaccatc
601 acccaacagt ctccaaaaga ttacattatt gaccctcggg agaatattgt aatccagtgt
661 gaagccaaag ggaaaccgcc cccaagcttt tcctggaccc gtaatgggac tcattttgac
721 atcgataaag accctctggt caccatgaag cctggcacag gaacgctcat aattaacatc
781 atgagcgaag ggaaagctga gacctatgaa ggagtctatc agtgtacagc aaggaacgaa
841 cgcggagctg cagtttctaa taacattgtt gtccgcccat ccagatcacc attgtggacc
901 aaagaaaaac ttgaaccaat cacacttcaa agtggtcagt ctttagtact tccctgcaga
961 cccccaattg gattaccacc acctataata ttttggatgg ataattcctt tcaaagactt
1021 ccacaaagtg agagagtttc tcaaggtttg aatggggacc tttatttttc caatgtcctc
1081 ccagaggaca cccgcgaaga ctatatctgt tatgctagat ttaatcatac tcaaaccata
1141 cagcagaagc aacctatttc tgtgaaggtg atttcagtgg atgaattgaa tgacactata
1201 gctgctaatt tgagtgacac tgagttttat ggtgctaaat caagtagaga gaggccacca
1261 acatttttaa ctccagaagg caatgcaagt aacaaagagg aattaagagg aaatgtgctt
1321 tcactggagt gcattgcaga aggactgcct accccaatta tttactgggc aaaggaagat
1381 ggaatgctac ccaaaaacag gacagtttat aagaactttg agaaaacctt gcagatcatt
1441 catgtttcag aagcagactc tggaaattac caatgtatag caaaaaacgc attaggagcc
1501 atccaccata ccatttctgt tagagttaaa gcggctccat actggatcac agcccctcaa
1561 aatcttgtgc tgtccccagg agaggatggg accttgatct gcagagctaa tggcaacccc
1621 aaacccagaa ttagctggtt aacaaatgga gtcccaatag aaattgcccc tgatgacccc
1681 agcagaaaaa tagatggcga taccattatt ttttcaaatg ttcaagaaag atcaagtgca
1741 gtatatcagt gcaatgcctc taatgaatat ggatatttac tggcaaacgc atttgtaaat
1801 gtgctggctg agccaccacg aatcctcaca cctgcaaaca cactctacca ggtcattgca
1861 aacaggcctg ctttactaga ctgtgccttc tttgggtctc ctctcccaac catcgagtgg
1921 tttaaaggag ctaaaggaag tgctcttcat gaagatattt atgttttaca tgaaaatgga
1981 actttggaaa ttcctgtggc ccaaaaggac agtacaggaa cttatacgtg tgttgcaagg
2041 aataaattag ggatggcaaa gaatgaagtt cacttagaaa tcaaagatgc tacatggatc
2101 gttaaacagc ccgaatatgc agttgtgcaa agagggagca tggtgtcctt tgaatgcaaa
2161 gtgaaacatg atcacacctt atccctcact gtcctgtggc tgaaggacaa cagggaactg
2221 cccagtgatg aaaggttcac tgttgacaag gatcatctag tggtagctga tgtcagtgac
2281 gatgacagcg ggacctacac gtgtgtggcc aacaccactc tggacagcgt ctccgccagc
2341 gctgtgctta gcgttgttga tgtcccaaat cctccctttg acttagaact gacagatcaa
2401 cttgacaaaa gtgttcagct gtcatggacc ccaggcgatg acaacaatag ccccattaca
2461 aaattcatca tcgaatatga agatgcaatg cacaagccag ggctgtggca ccaccaaact
2521 gaagtttctg gaacacagac cacagcccag ctgaagctgt ctccttacgt gaactactcc
2581 ttccgcgtga tggcagtgaa cagcattggg aagagcttgc ccagcgaggc ctctgagcag
2641 tatttgacga aagcctcaga accagataaa aaccccacag ctgtggaagg actgggatca
2701 gagcctgata atttggtgat tacgtggaag cccttgaatg gtttcgaatc taatgggcca
2761 ggccttcaga caagtactgc ctctttttaa aatattaggt ttgagtccat ctaaaggcaa
2821 agtcattatg tgttttgaga ggatggtttt attaaatata aatgtaaatg acaagagaga
2881 aaaaggaaga gaataactaa atgggtgcct gtcacaggtt tgtactaatg tattttcagc
2941 tgaatcagga atgagttact gaaactcaaa accttgaatc gtgcgagcac ggtgaaatgt
3001 caatttaata catgttgaaa cattcagaaa aaaaaaaaaa aaa
//