LOCUS BC098383 5086 bp mRNA linear HTC 19-OCT-2006
DEFINITION Homo sapiens cDNA clone IMAGE:30520261, containing frame-shift
errors.
ACCESSION BC098383
VERSION BC098383.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 5086)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 5086)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-JUL-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Stefan Hansson
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 198 Row: m Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 19923789
This clone has the following problem: frame shifted.
FEATURES Location/Qualifiers
source 1..5086
/db_xref="H-InvDB:HIT000335937"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:30520261"
/tissue_type="Placenta, normal"
/clone_lib="NIH_MGC_147"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
BASE COUNT 1513 a 1013 c 1145 g 1415 t
ORIGIN
1 agagctattg gggctcggtg gcggccgcag tggggtggag ggggcagggc gtggtgaggt
61 aaggtgagtg ccgtagtggg gttccctgga gccatggcct gctccattgt ccagttctgc
121 tacttccagg acctccaggc cgcccgggac ttcctctttc ctcacctgcg ggaggagatc
181 ctcagcggcg ccttgcggag ggaccccagt aaatcaacag actgggaaga tgatggttgg
241 ggagcatggg aagaaaatga accacaagaa cctgaagaag aaggaaatac ttgcaaaaca
301 caaaaaactt cctggctcca agattgtttt atccttatct ccaaccaatg atcttatggt
361 gatagctcga gagcaaaaag ctgtatttct agtgccaaaa tggaaatata gtgataaagg
421 aaaggaagaa atgcaatttg ctgttggctg gagtggttcc ttaaatgtcg aagaagggga
481 atgtgtaacc agtgctctat gtatcccact agcaagccaa aagaggagtt ccactgggcg
541 tcctgactgg acctgcattg tggtgggttt tacttcaggt tatgtacgct tctacactga
601 gggcccttct ctgtgcttcc tcctagaatg gtgtgctctt gcttgcacag cttttgaatg
661 aggacccagt acttcaactt aaatgcagaa cctatgaaat accacgacat cccggcgtga
721 ctgagcagaa tgaagagttg agtatcttat atccagctgc cattgtgact attgatggat
781 ttagcctttt tcaatctctt cgtgcttgtc gaaatcaggt agcaaaagct gcagcatcag
841 gcaatgagaa catacaacca ccaccattag cttataagaa atggggtcta caagatattg
901 acactattat tgatcatgct agtgttggta ttatgactct gtcccccttt gatcaaatga
961 agactgcctc caatataggt ggatttaatg cagcaattaa aaatagtcca cctgccatgt
1021 ctcagtatat cactgtaggg tccaatccat ttactggctt cttctatgct ttagagggaa
1081 gcacacaacc attattatcc catgttgcac tagcagttgc aagtaaactc acttctgctt
1141 tatttaatgc tgccagtggt tggcttggtt ggaaaagtaa gcacgaagaa gaagctgtcc
1201 aaaagcaaaa gccgaaggtt gagccagcta ccccattagc tatttggact tccagattct
1261 agacgccatg gtgaaagcat atgtctgtct ccatgtaaca cactggcagc agtaacagat
1321 gatttcggca gagttatttt attggatgta gctagaggaa ttgcaatacg catgtggaaa
1381 gggtaccgcg acgcacaaat tggatggatt caaactgtag aggacctcca tgaaagagtg
1441 ccagaaaagg cagatttttc cccctttgga aattctcagg gtccaagtcg agtagctcaa
1501 ttccttgtga tctatgcgcc aagaagggga attttagaag tgtggagcac acagcaggga
1561 cctagagtag gagctttcaa tgtggggaag cactgcaggc tgctgtatcc tggctataaa
1621 ataatgggtt taaataatgt taccagtcag agttggcagc cacagactta tcagatctgt
1681 ctggttgatc cagtgtctgg aagtgtgaaa acagtgaacg ttcccttcca tttagcactg
1741 agtgataaga agagtgaacg agccaaggat atgcacctag tgaagaaact agcagcctta
1801 ctgaaaacaa aatctcccaa tcttgatttg gttgaaacag aaataaagga attaattctt
1861 gatattaaat accctgcaac caaaaaacaa gctttggaaa gcattttggc aagtgaacgt
1921 ttaccatttt cttgccttag aaacatcact cagactttaa tggacacttt aaaaagtcaa
1981 gaacttgagt ctgttgatga aggattgcta cagttttgtg ccaataaact aaaactgctg
2041 caactctatg agtctgtcag tcaattaaat tcccttgatt ttcatttaga cacaccattc
2101 tctgataatg acttggctct gttactaagg cttgatgaaa aagaactgct taagctccag
2161 gcattactag agaaatataa gcaagagaac accaggacaa atgttcgatt ttctgatgat
2221 aaagatggtg tgttgcctgt aaaaacattc ttggaatatt tagaatatga aaaggatgtg
2281 ctcaacataa agaaaataag tgaagaggaa tatgtggctt taggtagttt ctttttttgg
2341 aagtgtttgc atggagaaag ctccactgag gatatgtgtc acactttgga gtcggctggt
2401 cttagccctc agctgttgtt gtctctgctc ctgagtgttt ggctttcaaa ggaaaaggat
2461 attttggata aaccacagtc aatctgctgt cttcatacca tgctgtccct cctgagcaag
2521 atgaaagtgg ccatcgatga gacctgggat tctcagtctg tgtccccatg gtggcagcag
2581 atgcgcacag cctgtattca gtctgagaac aatggagccg ctctgttgtc tgcgcatgtt
2641 gggcattctg ttgctgcaca gatatcaaac aacatgacag agaaaaaatt ttcccaaaca
2701 gttttgggtg ctgattcaga ggccctcact gattcctggg aggcactttc tcttgacact
2761 gagtactgga aactccttct gaaacagctg gaggattgtc tcatacttca gactctgctt
2821 cacagcaaag ggaacactca gacctccaaa gtgtcatcac tgcaggctga gccacttcca
2881 aggctttctg ttaaaaagtt attagaagga ggaaaaggtg gcattgcaga cagtgtagcc
2941 aagtggatat ttaaacagga cttcagccct gaagtattaa aactggctaa tgaagaaaga
3001 gatgcagaaa acccagatga acccaaagaa ggtgttaaca gaagtttcct tgaggtatca
3061 gagatggaga tggacttagg agccatacca gacttactgc atttagccta tgagcagttt
3121 ccttgtagcc ttgagctcga tgtcttgcat gcacattgct gctgggagta cgttgttcag
3181 tggaataaag atccagagga agcacgtttt tttgttaggt caatagaaca cttgaagcaa
3241 atatttaatg cacatgttca aaatggcatt gcactgatga tgtggaatac gttcttagtt
3301 aaaagatttt ctgctgctac atacttaatg gataaggttg gaaaatcacc aaaagatagg
3361 ttatgccgaa gggatgtggg aatgagtgac acagcaatga catctttcct cggctcctgt
3421 ttggatcttc ttcagatctt aatggaggca gatgttagca gggatgaaat acaggtgcct
3481 gtgctggata ctgaggatgc gtggctctcc gtggaaggac caatctccat agtggaactg
3541 gcccttgaac agaagcacat ccactaccca ctggtggagc accactccat cctgtgctcc
3601 atcttgtatg cagtcatgag gttttctctg aagaccgtga agccactttc actttttgac
3661 agtaagggaa aaaatgcatt tttcaaagac ctaacttcaa ttcagttatt acctagtggg
3721 gaaatggatc caaattttat ttctgtacga caacagttct tattgaaagt tgtcagtgca
3781 gctgtccagg cccaacattc agccacaaag gtcaaagatc ccacagaaga ggccacaccc
3841 actccttttg ggaaagacca agattggcca gctctagctg tggatttagc ccatcacctt
3901 caagttagtg aagatgttgt tagaaggcat tatgtggggg aactatacaa ctatggagtt
3961 gaccacttag gagaagaggc cattctacag gttcatgaca aagaggtcct tgcctctcag
4021 ctgctggtgc tcacggggca aaggctggct catgcgcttc tccacaccca gacaaaagaa
4081 ggaatggagc tgcttgccag acttccaccc acactgtgta cttggctgaa agcaatggac
4141 ccccaggacc ttcaaaacac tgaagtgcca attgcaacaa cagctaaact agtaaataaa
4201 gtaattgagc ttttaccaga aaaacatggg caatatggtc tagccttaca cctcattgaa
4261 gctgtggaag ccatatctct tccttcttta tgacacttac ctactggaaa tagtctaaaa
4321 ttatgattat aacatgaagt agtgcatggt tattttacat agtaagacct ggaattttat
4381 gggaaaagta tgtctttttt tttccttttg taaaataaat aaaagtatat acaactttta
4441 aaaagtgcaa ccctggctaa attccactcc tttggttaat actgaagata aaatataaac
4501 aaatgtcaac tctgttataa ttaatacaga tgttttactg tttatttcta attcaaacac
4561 ttaagtagct ttattgttaa actttgctat ttaaaattgg ttataattta gattatgttc
4621 ttataagatt ctatatttcc tatctaaaat gttgttgtaa ttcaatttaa atgtgttcat
4681 gtacagtccc catcagtagc gtatagaaca ccccactctc ctttagtaaa tgttgagaaa
4741 atgcctttgt tgtcatgctc caaatcccac actgggctgc cacctgggag ttctggatac
4801 cgaaaggttc ctttcccaga ggttctgctg ttgccatcag aggaggatga ccgtgcttga
4861 ggaggaagaa tgggttcaag atcatcatat tcatcagaag gggacactaa atagaaccct
4921 taacctgttg tacttgccaa aattgagaat cagagatgtg taaaatgcag caaattaatt
4981 ataatgtaag ttaagatttg ctttttgcca agttgcaaag ttgtatccac atcaggtcac
5041 tgtaaaaatg tattatcttg taaaacttat gcaaaaaaaa aaaaaa
//