LOCUS BC098266 2452 bp mRNA linear HUM 16-JUN-2008
DEFINITION Homo sapiens ring finger protein 220, mRNA (cDNA clone MGC:120630
IMAGE:40026694), complete cds.
ACCESSION BC098266
VERSION BC098266.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2452)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2452)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-JUN-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 4 Row: o Column: 18.
FEATURES Location/Qualifiers
source 1..2452
/db_xref="H-InvDB:HIT000335843"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:120630 IMAGE:40026694"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_283"
/note="Vector: pCR-Blunt II-TOPO with reversed insert;
Clone identification sequence tag: GTAGAG"
gene 1..2452
/gene="RNF220"
/gene_synonym="RP4-678E16.1"
/db_xref="GeneID:55182"
/db_xref="HGNC:HGNC:25552"
CDS 159..1859
/gene="RNF220"
/gene_synonym="RP4-678E16.1"
/codon_start=1
/product="ring finger protein 220"
/protein_id="AAH98266.1"
/db_xref="GeneID:55182"
/db_xref="HGNC:HGNC:25552"
/translation="MDLHRAAFKMENSSYLPNPLASPALMVLASTAEASRDASIPCQQ
PRPFGVPVSVDKDVHIPFTNGSYTFASMYHRQGGVPGTFANRDFPPSLLHLHPQFAPP
NLDCTPISMLNHSGVGAFRPFASTEDRESYQSAFTPAKRLKNCHDTESPHLRFSDADG
KEYDFGTQLPSSSPGSLKVDDTGKKIFAVSGLISDREASSSPEDRNDRCKKKAAALFD
SQAPICPICQVLLRPSELQEHMEQELEQLAQLPSSKNSLLKDAMAPGTPKSLLLSASI
KREGESPTASPHSSATDDLHHSDRYQTFLRVRANRQTRLNARIGKMKRRKQDEGQREG
SCMAEDDAVDIEHENNNRFEEYEWCGQKRIRATTLLEGGFRGSGFIMCSGKENPDSDA
DLDVDGDDTLEYGKPQYTEADVIPCTGEEPGEAKEREALRGAVLNGGPPSTRITPEFS
KWASDEMPSTSNGESSKQEAMQKTCKNSDIEKITEDSAVTTFEALKARVRELERQLSR
GDRYKCLICMDSYSMPLTSIQCWHVHCEECWLRTLGAKKLCPQCNTITAPGDLRRIYL
"
BASE COUNT 565 a 723 c 641 g 523 t
ORIGIN
1 tgtcctgaaa agtgcgaccg ttctcccaag gaatttccac ggtcttagga gggaatgatt
61 ccccagtaat attccctgcc ctgacccaaa gtgctggttg gcctccctcc cagggaagac
121 tgcttcttgc gtaacgccgg ccacagaaag agactccgat ggacttacac cgggcagcct
181 tcaagatgga gaactcatcc taccttccca accctctggc atccccagca ctgatggtcc
241 tggcatccac ggctgaggcc agccgtgatg cttccatccc ttgtcagcag ccacgaccct
301 ttggtgtacc tgtctcagtt gacaaggacg tgcatattcc tttcaccaac ggttcctata
361 cctttgcctc tatgtaccat cggcaaggtg gggtgccagg cacttttgcc aatcgtgatt
421 tccccccttc tctactacac ctccaccctc aatttgctcc cccaaatcta gattgcaccc
481 caatcagtat gctgaatcat agtggtgtgg gggctttccg gccctttgcc tccaccgagg
541 accgggagag ctatcagtca gcctttacgc cggccaagcg acttaagaac tgccatgaca
601 cagagtctcc ccacttgcgc ttctcagatg cagatggcaa ggaatatgac tttgggacac
661 agctgccatc tagctccccc ggttcactaa aggttgatga cactgggaag aagatttttg
721 ctgtctctgg cctcatttct gatcgggaag cctcatctag cccagaggat cggaatgaca
781 gatgtaagaa gaaagcagcg gcattgttcg acagccaggc cccaatttgc cccatctgcc
841 aggtcctgct gaggcccagt gagctgcagg agcatatgga gcaggaactg gagcagctag
901 cccaactgcc ctcgagcaag aattcccttc tgaaggatgc catggctcca ggcaccccaa
961 agtccctcct gttgtctgct tccatcaaga gggaaggaga gtctccaacg gcatcacccc
1021 actcatctgc caccgatgac ctccaccatt cagacagata ccagaccttt ctgcgagtac
1081 gagccaaccg gcagacccga ctgaatgctc ggattgggaa aatgaaacgg aggaagcaag
1141 atgaagggca gagggaaggc tcctgcatgg ctgaggatga tgctgtggac atcgagcatg
1201 agaacaacaa ccgctttgag gagtatgagt ggtgtggaca gaagcggata cgggccacca
1261 ctctcctgga aggtggcttc cgaggctctg gcttcatcat gtgcagcggc aaagagaacc
1321 cggacagtga tgctgacttg gatgtggatg gggatgacac tctggagtat gggaagccac
1381 aatacacaga ggctgatgtc atcccctgca caggcgagga gcctggtgaa gccaaggaga
1441 gagaggcact tcggggcgca gtcctaaatg gcggccctcc cagcacgcgc atcacacctg
1501 agttctctaa atgggccagt gatgagatgc catccaccag caatggtgaa agcagcaagc
1561 aggaggccat gcagaagacc tgcaagaaca gcgacatcga gaaaatcacc gaagattcag
1621 ctgtgaccac gtttgaggct ctgaaggctc gggtcagaga acttgaacgg cagctatctc
1681 gtggggaccg ttacaaatgc ctcatctgca tggactcgta ctcgatgccc ctaacgtcca
1741 tccagtgttg gcacgtgcac tgcgaggagt gctggctgcg gaccctgggt gccaagaagc
1801 tctgccctca gtgcaacacg atcacagcgc ccggagacct gcggaggatc tacttgtgag
1861 ctatctgccc caggcaggcc tcgcctccag cagccccacc tgcccccagc ctctgtgaca
1921 gtgaccgtct ccctttgtac atacttgcac acaggttccc catgtacata catgcacata
1981 ctcaaacatg cgtacacaca cacacattta cacacgcagg actctggagc cagagtagag
2041 gctgtggccc aggcactacc tgctggctcc cacctatggt ttgggggcca tacctgttcc
2101 agctctgttc ccagggtggg gcagggaggt gggggttggg ggagtagtgg ggcacggctc
2161 ctaagatcca gcccccatac tgacagacgg acagacagac atgcaaacac cagactgaag
2221 cacatgtaat atagaccgtg tatgtttaca atgttgtgta taaatgggac aactcctcgc
2281 cctctacctg tcccctcccc ctttggttgt atgattttct tcttttttaa gaacccctgg
2341 aagcagcgcc tccttcaggg ttggctggga gctcggccca tccacctctt ggggtacctg
2401 cctctctctc tcctgtggtg tcccttccct ctcccatgtg ctcggtgttc ag
//