LOCUS BC098121 2816 bp mRNA linear HUM 21-JAN-2006
DEFINITION Homo sapiens suppressor of variegation 4-20 homolog 1 (Drosophila),
mRNA (cDNA clone MGC:118907 IMAGE:40001705), complete cds.
ACCESSION BC098121
VERSION BC098121.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2816)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2816)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JUN-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 4 Row: a Column: 16.
FEATURES Location/Qualifiers
source 1..2816
/db_xref="H-InvDB:HIT000335766"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:118907 IMAGE:40001705"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_283"
/note="Vector: pCR-Blunt II-TOPO with reversed insert;
Clone identification sequence tag: TGAGTG"
gene 1..2816
/gene="SUV420H1"
/gene_synonym="CGI-85"
/gene_synonym="MGC21161"
/gene_synonym="MGC703"
/db_xref="GeneID:51111"
/db_xref="HGNC:HGNC:24283"
/db_xref="IMGT/GENE-DB:24283"
/db_xref="MIM:24283"
CDS 1293..2708
/gene="SUV420H1"
/gene_synonym="CGI-85"
/gene_synonym="MGC21161"
/gene_synonym="MGC703"
/codon_start=1
/product="SUV420H1 protein"
/protein_id="AAH98121.1"
/db_xref="GeneID:51111"
/db_xref="HGNC:HGNC:24283"
/db_xref="IMGT/GENE-DB:24283"
/db_xref="MIM:24283"
/translation="MSRIPASSNSTSSKLTHINNSRVPKKLKKPAKPLLSKIKLRNHC
KRLEQKNASRKLEMGNLVLKEPKVVLYKNLPIKKDKEPEGPAQAAVASGCLTRHAARE
HRQNPVRGAHSQGESSPCTYITRRSVRTRTNLKEASDIKLEPNTLNGYKSSVTEPCPD
SGEQLQPAPVLQEEELAHETAQKGEAKCHKSDTGMSKKKSRQGKLVKQFAKIEESTPV
HDSPGKDDAVPDLMGPHSDQGEHSGTVGVPVSYTDCAPSPVGCSVVTSDSFKTKDSFR
TAKSKKKRRITRYDAQLILENNSGIPKLTLRRRHDSSSKTNDQENDGMNSSKISIKLS
KDHDNDNNLYVAKLNNGFNSGSGSSSTKLKIQLKRDEENRGSYTEGLHENGVCCSDPL
SLLESRMEVDDYSQYEEESTDDSSSSEGDEEEDDYDDDFEDDFIPLPPAKRLRLIVGK
DSIDIDISSRRREDQSLRLNA"
BASE COUNT 952 a 530 c 655 g 679 t
ORIGIN
1 tgggtatgaa gtggttggga gaatccaaga acatggtggt gaatggcagg agaaatggag
61 gcaagttgtc taatgaccat cagcagaatc aatcaaaatt acagcacacg gggaaggaca
121 ccctgaaggc tggcaaaaat gcagtcgaga ggaggtcgaa cagatgtaat ggtaactcgg
181 gatttgaagg acagagtcgc tatgtaccat cctctggaat gtccgccaag gaactctgtg
241 aaaatgatga cctagcaacc agtttggttc ttgatcccta tttaggtttt caaacacaca
301 aaatgaatac tagcgccttt ccttcgagga gctcaaggca tttttcaaaa tctgacagtt
361 tttctcacaa caaccctgtg agatttaggc ctattaaagg aaggcaggaa gaactaaagg
421 aagtaattga acgttttaag aaagatgaac acttggagaa agccttcaaa tgtttgactt
481 caggcgaatg ggcacggcac tattttctca acaagaataa aatgcaggag aaattattca
541 aagaacatgt atttatttat ttgcgaatgt ttgcaactga cagtggattt gaaatattgc
601 catgtaatag atactcatca gaacaaaatg gagccaaaat agttgcaaca aaagagtgga
661 aacgaaatga caaaatagaa ttactggtgg gttgtattgc cgaactttca gaaattgagg
721 agaacatgct acttagacat ggagaaaacg acttcagtgt catgtactcc acaaggaaaa
781 actgtgctca actctggctg ggtcctgctg cgtttataaa ccatgatctt atcaacagtt
841 aattgacttt atcttttgga catttttcag attgcagacc taattgtaag tttgtgtcaa
901 ctggtcgaga tacagcatgt gtgaaggctc taagagacat tgaacctgga gaagaaattt
961 cttgttatta tggagatggg ttctttggag aaaataatga gttctgcgag tgttacactt
1021 gcgaaagacg gggcactggt gcttttaaat ccagagtggg actgcctgcg cctgctcctg
1081 ttatcaatag caaatatgga ctcagagaaa cagataaacg tttaaatagg cttaaaaagt
1141 taggtgacag cagcaaaaat tcagacagtc aatctgtcag ctctaacact gatgcagata
1201 ccactcagga aaaaaacaat gcaacttcta accgaaaatc ttcagttggc gtaaaaaaga
1261 atagcaagag cagaacgtta acgaggcaat ctatgtcaag aattccagct tcttccaact
1321 ctacctcatc taagctaact catataaata attccagggt accaaagaaa ctgaagaagc
1381 ctgcaaagcc tttactttca aagataaaat tgagaaatca ttgcaagcgg ctggagcaaa
1441 agaatgcttc aagaaaactc gaaatgggaa acttagtact gaaagagcct aaagtagttc
1501 tgtataaaaa tttgcccatt aaaaaagata aggagccaga gggaccagcc caagccgcag
1561 ttgccagcgg gtgcttgact agacacgcgg cgagagaaca cagacagaat cctgtgagag
1621 gtgctcattc gcagggggag agctcgccct gcacctacat aactcggcgg tcagtgagga
1681 caagaacaaa tctgaaggag gcctctgaca tcaagcttga accaaatacg ttgaatggct
1741 ataaaagcag tgtgacggaa ccttgccccg acagtggtga acagctgcag ccagctcctg
1801 tgctgcagga ggaagaactg gctcatgaga ctgcacaaaa aggggaggca aagtgtcata
1861 agagtgacac aggcatgtcc aaaaagaagt cacgacaagg aaaacttgtg aaacagtttg
1921 caaaaataga ggaatctact ccagtgcacg attctcctgg aaaagacgac gcggtaccag
1981 atttgatggg tccccattct gaccagggtg agcacagtgg cactgtgggc gtgcctgtga
2041 gctacacaga ctgtgctcct tcacccgtcg gttgttcagt tgtgacatca gatagcttca
2101 aaacaaaaga cagctttaga actgcaaaaa gtaaaaagaa gaggcgaatc acaaggtatg
2161 atgcacagtt aatcctagaa aataactctg ggattcccaa attgactctt cgtaggcgtc
2221 atgatagcag cagcaaaaca aatgaccaag agaatgatgg aatgaactct tccaaaataa
2281 gcatcaagtt aagcaaagac catgacaacg ataacaatct ctatgtagca aagcttaata
2341 atggatttaa ctcaggatca ggcagtagtt ctacaaaatt aaaaatccag ctaaaacgag
2401 atgaggaaaa tagggggtct tatacagagg ggcttcatga aaatggggtg tgctgcagtg
2461 atcctctttc tctcttggag tctcgaatgg aggtggatga ctatagtcag tatgaggaag
2521 aaagtacaga tgattcctcc tcttctgagg gcgatgaaga ggaggatgac tatgatgatg
2581 actttgaaga cgattttatt cctcttcctc cagctaagcg cttgaggtta atagttggaa
2641 aagactctat agatattgac atttcttcaa ggagaagaga agatcagtct ttaaggctta
2701 atgcctaagc tcttggtctt aacttgacct gggataacta ctttaaagaa ataaaaaatt
2761 ccagtcaatt attcctcaac tgaaagttta gtggcagcac ttctattgtc ccttca
//