LOCUS BC096758 2763 bp mRNA linear HUM 26-JUN-2007
DEFINITION Homo sapiens ubiquitin protein ligase E3 component n-recognin 4,
mRNA (cDNA clone IMAGE:4849875), partial cds.
ACCESSION BC096758
VERSION BC096758.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2763)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2763)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-JUN-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Mark Watson
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 62 Row: b Column: 11.
FEATURES Location/Qualifiers
source 1..2763
/db_xref="H-InvDB:HIT000335715"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4849875"
/tissue_type="Spleen"
/clone_lib="NIH_MGC_113"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..2763
/gene="UBR4"
/gene_synonym="p600"
/gene_synonym="RBAF600"
/gene_synonym="RP5-1126H10.1"
/db_xref="GeneID:23352"
/db_xref="HGNC:HGNC:30313"
/db_xref="MIM:609890"
CDS <1..2432
/gene="UBR4"
/gene_synonym="p600"
/gene_synonym="RBAF600"
/gene_synonym="RP5-1126H10.1"
/codon_start=3
/product="UBR4 protein"
/protein_id="AAH96758.1"
/db_xref="GeneID:23352"
/db_xref="HGNC:HGNC:30313"
/db_xref="MIM:609890"
/translation="LVALLEDDSGMELLVNNKIISLDLPVAEVYKKVWCTTNEGEPMR
IVYRMRGLLGDATEEFIESLDSTTDEEEDEEEVYKMAGVMAQCGGLECMLNRLAGIRD
FKQGRHLLTVLLKLFSYCVKVKVNRQQLVKLEMNTLNVMLGTLNLALVAEQESKDSGG
AAVAEQVLSIMEIILDESNAEPLSEDKGNLLLTGDKDQLVMLLDQINSTFVRSNPSVL
QGLLRIIPYLSFGEVEKMQILVERFKPYCNFDKYDEDHSGDDKVFLDCFCKIAAGIKN
NSNGHQLKDLILQKGITQNALDYMKKHIPSAKNLDADIWKKFLSRPALPFILRLLRGL
AIQHPGTQVLIGTDSIPNLHKLEQVSSDEGIGTLAENLLEALREHPDVNKKIDAARRE
TRAEKKRMAMAMRQKALGTLGMTTNEKGQVVTKTALLKQMEELIEEPGLTCCICREGY
KFQPTKVLGIYTFTKRVALEELENKPRKQQGYSTVSHFNIVHYDCHLAAVRLARGREE
WESAALQNANTKCNGLLPVWGPHVPESAFATCLARHNTYLQECTGQREPTYQLNIHDI
KLLFLRFAMEQSFSADTGGGGRESNIHLIPYIIHTVLYVLNTTRATSREEKNLQGFLE
QPKEKWVESAFEVDGPYYFTVLALHILPPEQWRATRVEILRRLLVTSQARAVAPGGAT
RLTDKAVKDYSAYRSSLLFWALVDLIYNMFKKQTTPTVGGIDTGSLEPCVCEKVPTSN
TEGGWSCSLAEYIRHNDMPIYEAADKALKTFQEEFMPVETFSEFLDVAGLLSEITDPE
SFLKDLLNSVP"
BASE COUNT 700 a 722 c 744 g 597 t
ORIGIN
1 acttagtggc cctcctggaa gatgacagtg gcatggagct tctagtgaac aataaaatca
61 ttagtttgga ccttcctgtg gctgaagttt acaagaaagt ctggtgtacc acgaatgagg
121 gagagcccat gaggattgtt tatcgtatgc gggggctgct gggcgatgcc acagaggagt
181 tcattgagtc cctggactct actacagatg aagaagaaga tgaagaagaa gtgtataaaa
241 tggctggtgt gatggcccag tgtgggggcc tggaatgcat gcttaacaga ctcgcaggga
301 tcagagattt caagcaggga cgccaccttc taacagtgct actgaaattg ttcagttact
361 gcgtgaaggt gaaagtcaac cggcagcaac tggtcaaact ggaaatgaac accttgaacg
421 tcatgctggg gaccctaaac ctggcccttg tagctgaaca agaaagcaag gacagtgggg
481 gtgcagctgt ggctgagcag gtgcttagca tcatggagat cattctagat gagtccaatg
541 ctgagcccct gagtgaggac aagggcaacc tcctcctgac aggtgacaag gatcaactgg
601 tgatgctctt ggaccagatc aacagcacct ttgttcgctc caaccccagt gtgctccagg
661 gcctgcttcg catcatcccg tacctttcct ttggagaggt ggagaaaatg cagatcttgg
721 tggagcgatt caaaccatac tgcaactttg ataaatatga tgaagatcac agtggtgatg
781 ataaagtctt cctggactgc ttctgtaaaa tagctgctgg catcaagaac aacagcaatg
841 ggcaccagct gaaggatctg attctccaga aggggatcac ccagaatgca cttgactaca
901 tgaaaaagca catccctagc gccaagaatt tggatgccga catctggaaa aagtttttgt
961 ctcgcccagc cttgccattt atcctaaggc tgcttcgggg cctggccatc cagcaccctg
1021 gcacccaggt tctgattgga actgattcca tcccgaacct gcataagctg gagcaggtgt
1081 ccagtgatga gggcattggg accttggcag agaacctgct ggaagccctg cgggaacacc
1141 ctgacgtaaa caagaagatt gacgcagccc gcagggagac ccgggcagag aagaaacgca
1201 tggccatggc aatgaggcag aaggccctgg gcaccctggg catgacgaca aatgaaaagg
1261 gccaggtcgt gaccaagaca gcactcctga agcagatgga agagctgatc gaggagcctg
1321 gcctcacgtg ctgcatctgc agggagggat acaagttcca gcccacaaag gtcctgggca
1381 tttatacctt cacgaagcgg gtagccttgg aggagttgga gaataagccc cggaaacagc
1441 agggctacag caccgtgtcc cacttcaaca ttgtgcacta cgactgccat ctggctgccg
1501 tcaggttggc tcgaggccgg gaagagtggg agagtgccgc cctgcagaat gccaacacca
1561 agtgcaacgg gctccttccg gtctggggac ctcatgtccc tgaatcagct tttgccactt
1621 gcttggcaag acacaacact tacctccagg aatgtacagg ccagcgggag cccacgtatc
1681 agctcaacat ccacgacatc aaactgctct tcctgcgctt cgccatggag cagtcgttca
1741 gcgcagacac tggcgggggc ggccgggaga gcaacatcca cctgatcccg tacatcattc
1801 acactgtgct ttacgtcctg aacacaaccc gagcaacttc ccgagaagag aagaacctcc
1861 aaggctttct ggaacagccc aaggagaagt gggtggagag tgcctttgaa gtggacgggc
1921 cctactattt cacagtcttg gcccttcaca tcctgccccc tgagcagtgg agagccacac
1981 gtgtggaaat cttgcggagg ctgttggtga cctcgcaggc tcgggcagtg gctccaggtg
2041 gagccaccag gctgacagat aaggcagtga aggactattc cgcttaccgt tcttcccttc
2101 tcttttgggc cctcgtcgat ctcatttaca acatgtttaa gaaacaaaca accccaactg
2161 tgggagggat tgacactggc agcctggagc cttgtgtctg tgagaaggtg cctaccagta
2221 acacagaggg aggctggtcc tgctctctcg ctgagtacat ccgccacaac gacatgccca
2281 tctacgaagc tgccgacaaa gccctgaaaa ccttccagga ggagttcatg ccagtggaga
2341 ccttctcaga gttcctcgat gtggccggtc ttttatcaga aatcaccgat ccagagagct
2401 tcctgaagga cctgttgaac tcagtcccct gaccaccaca cagcagctgc ggcggcgaag
2461 acgaagctgg cttgccttcc accctctgtt ctccctcctt gtgcattaag ttccctccgc
2521 gggatgctgc attgttaccc cgccctcccc tctctcattt ttcttggtgt ggcttggggt
2581 ttttaggctt cctgttttat ctcgtgtgtg tggtgcacca gctatgaggt tgtctgtaac
2641 ccaagccatc aaagggcctg tacataccta ggagccatga gttgtcccgg ccagcttcat
2701 acttgagtgt gcacatcttg agaaataaac aagtgactta acacaaaaaa aaaaaaaaaa
2761 aaa
//