LOCUS BC096348 3645 bp mRNA linear HUM 04-OCT-2006
DEFINITION Homo sapiens integrin, alpha M (complement component 3 receptor 3
subunit), mRNA (cDNA clone MGC:117045 IMAGE:40008972), complete
cds.
ACCESSION BC096348
VERSION BC096348.3
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3645)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3645)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-MAY-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Jun 29, 2006 this sequence version replaced BC096348.2.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 2 Row: l Column: 24.
FEATURES Location/Qualifiers
source 1..3645
/db_xref="H-InvDB:HIT000335636"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:117045 IMAGE:40008972"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_282"
/note="Vector: pCR-Blunt II-TOPO; Clone identification
sequence tag: GGCATTCT sequenced from the reverse primer"
gene 1..3645
/gene="ITGAM"
/gene_synonym="MAC-1"
/gene_synonym="MAC1A"
/gene_synonym="MO1A"
/db_xref="GeneID:3684"
/db_xref="HGNC:HGNC:6149"
/db_xref="MIM:120980"
CDS 65..3523
/gene="ITGAM"
/gene_synonym="MAC-1"
/gene_synonym="MAC1A"
/gene_synonym="MO1A"
/codon_start=1
/product="integrin, alpha M (complement component 3
receptor 3 subunit)"
/protein_id="AAH96348.1"
/db_xref="GeneID:3684"
/db_xref="HGNC:HGNC:6149"
/db_xref="MIM:120980"
/translation="MALRVLLLTALTLCHGFNLDTENAMTFQENARGFGQSVVQLQGS
RVVVGAPQEIVAANQRGSLYQCDYSTGSCEPIRLQVPVEAVNMSLGLSLAATTSPPQL
LACGPTVHQTCSENTYVKGLCFLFGSNLRQQPQKFPEALRGCPQEDSDIAFLIDGSGS
IIPHDFRRMKEFVSTVMEQLKKSKTLFSLMQYSEEFRIHFTFKEFQNNPNPRSLVKPI
TQLLGRTHTATGIRKVVRELFNITNGARKNAFKILVVITDGEKFGDPLGYEDVIPEAD
REGVIRYVIGVGDAFRSEKSRQELNTIASKPPRDHVFQVNNFEALKTIQNQLREKIFA
IEGTQTGSSSSFEHEMSQEGFSAAITSNGPLLSTVGSYDWAGGVFLYTSKEKSTFINM
TRVDSDMNDAYLGYAAAIILRNRVQSLVLGAPRYQHIGLVAMFRQNTGMWESNANVKG
TQIGAYFGASLCSVDVDSNGSTDLVLIGAPHYYEQTRGGQVSVCPLPRGRARWQCDAV
LYGEQGQPWGRFGAALTVLGDVNGDKLTDVAIGAPGEEDNRGAVYLFHGTSGSGISPS
HSQRIAGSKLSPRLQYFGQSLSGGQDLTMDGLVDLTVGAQGHVLLLRSQPVLRVKAIM
EFNPREVARNVFECNDQVVKGKEAGEVRVCLHVQKSTRDRLREGQIQSVVTYDLALDS
GRPHSRAVFNETKNSTRRQTQVLGLTQTCETLKLQLPNCIEDPVSPIVLRLNFSLVGT
PLSAFGNLRPVLAEDAQRLFTALFPFEKNCGNDNICQDDLSITFSFMSLDCLVVGGPR
EFNVTVTVRNDGEDSYRTQVTFFFPLDLSYRKVSTLQNQRSQRSWRLACESASSTEVS
GALKSTSCSINHPIFPENSEVTFNITFDVDSKASLGNKLLLKANVTSENNMPRTNKTE
FQLELPVKYAVYMVVTSHGVSTKYLNFTASENTSRVMQHQYQVSNLGQRSLPISLVFL
VPVRLNQTVIWDRPQVTFSENLSSTCHTKERLPSHSDFLAELRKAPVVNCSIAVCQRI
QCDIPFFGIQEEFNATLKGNLSFDWYIKTSHNHLLIVSTAEILFNDSVFTLLPGQGAF
VRSQTETKVEPFEVPNPLPLIVGSSVGGLLLLALITAALYKLGFFKRQYKDMMSEGGP
PGAEPQ"
BASE COUNT 820 a 1050 c 1012 g 763 t
ORIGIN
1 tggttcctca gtggtgcctg caacccctgg ttcacctcct tccaggttct ggctccttcc
61 agccatggct ctcagagtcc ttctgttaac agccttgacc ttatgtcatg ggttcaactt
121 ggacactgaa aacgcaatga ccttccaaga gaacgcaagg ggcttcgggc agagcgtggt
181 ccagcttcag ggatccaggg tggtggttgg agccccccag gagatagtgg ctgccaacca
241 aaggggcagc ctctaccagt gcgactacag cacaggctca tgcgagccca tccgcctgca
301 ggtccccgtg gaggccgtga acatgtccct gggcctgtcc ctggcagcca ccaccagccc
361 ccctcagctg ctggcctgtg gtcccaccgt gcaccagact tgcagtgaga acacgtatgt
421 gaaagggctc tgcttcctgt ttggatccaa cctacggcag cagccccaga agttcccaga
481 ggccctccga gggtgtcctc aagaggatag tgacattgcc ttcttgattg atggctctgg
541 tagcatcatc ccacatgact ttcggcggat gaaggagttt gtctcaactg tgatggagca
601 attaaaaaag tccaaaacct tgttctcttt gatgcagtac tctgaagaat tccggattca
661 ctttaccttc aaagagttcc agaacaaccc taacccaaga tcactggtga agccaataac
721 gcagctgctt gggcggacac acacggccac gggcatccgc aaagtggtac gagagctgtt
781 taacatcacc aacggagccc gaaagaatgc ctttaagatc ctagttgtca tcacggatgg
841 agaaaagttt ggcgatccct tgggatatga ggatgtcatc cctgaggcag acagagaggg
901 agtcattcgc tacgtcattg gggtgggaga tgccttccgc agtgagaaat cccgccaaga
961 gcttaatacc atcgcatcca agccgcctcg tgatcacgtg ttccaggtga ataactttga
1021 ggctctgaag accattcaga accagcttcg ggagaagatc tttgcgatcg agggtactca
1081 gacaggaagt agcagctcct ttgagcatga gatgtctcag gaaggcttca gcgctgccat
1141 cacctctaat ggccccttgc tgagcactgt ggggagctat gactgggctg gtggagtctt
1201 tctatataca tcaaaggaga aaagcacctt catcaacatg accagagtgg attcagacat
1261 gaatgatgct tacttgggtt atgctgccgc catcatctta cggaaccggg tgcaaagcct
1321 ggttctgggg gcacctcgat atcagcacat cggcctggta gcgatgttca ggcagaacac
1381 tggcatgtgg gagtccaacg ctaatgtcaa gggcacccag atcggcgcct acttcggggc
1441 ctccctctgc tccgtggacg tggacagcaa cggcagcacc gacctggtcc tcatcggggc
1501 cccccattac tacgagcaga cccgaggggg ccaggtgtcc gtgtgcccct tgcccagggg
1561 gagggctcgg tggcagtgtg atgctgttct ctacggggag cagggccaac cctggggccg
1621 ctttggggca gccctaacag tgctggggga cgtaaatggg gacaagctga cggacgtggc
1681 cattggggcc ccaggagagg aggacaaccg gggtgctgtt tacctgtttc acggaacctc
1741 aggatctggc atcagcccct cccatagcca gcggatagca ggctccaagc tctctcccag
1801 gctccagtat tttggtcagt cactgagtgg gggccaggac ctcacaatgg atggactggt
1861 agacctgact gtaggagccc aggggcacgt gctgctgctc aggtcccagc cagtactgag
1921 agtcaaggca atcatggagt tcaatcccag ggaagtggca aggaatgtat ttgagtgtaa
1981 tgatcaggtg gtgaaaggca aggaagccgg agaggtcaga gtctgcctcc atgtccagaa
2041 gagcacacgg gatcggctaa gagaaggaca gatccagagt gttgtgactt atgacctggc
2101 tctggactcc ggccgcccac attcccgcgc cgtcttcaat gagacaaaga acagcacacg
2161 cagacagaca caggtcttgg ggctgaccca gacttgtgag accctgaaac tacagttgcc
2221 gaattgcatc gaggacccag tgagccccat tgtgctgcgc ctgaacttct ctctggtggg
2281 aacgccattg tctgctttcg ggaacctccg gccagtgctg gcggaggatg ctcagagact
2341 cttcacagcc ttgtttccct ttgagaagaa ttgtggcaat gacaacatct gccaggatga
2401 cctcagcatc accttcagtt tcatgagcct ggactgcctc gtggtgggtg ggccccggga
2461 gttcaacgtg acagtgactg tgagaaatga tggtgaggac tcctacagga cacaggtcac
2521 cttcttcttc ccgcttgacc tgtcctaccg gaaggtgtcc acgctccaga accagcgctc
2581 acagcgatcc tggcgcctgg cctgtgagtc tgcctcctcc accgaagtgt ctggggcctt
2641 gaagagcacc agctgcagca taaaccaccc catcttcccg gaaaactcag aggtcacctt
2701 taatatcacg tttgatgtag actctaaggc ttcccttgga aacaaactgc tcctcaaggc
2761 caatgtgacc agtgagaaca acatgcccag aaccaacaaa accgaattcc aactggagct
2821 gccggtgaaa tatgctgtct acatggtggt caccagccat ggggtctcca ctaaatatct
2881 caacttcacg gcctcagaga ataccagtcg ggtcatgcag catcaatatc aggtcagcaa
2941 cctggggcag aggagcctcc ccatcagcct ggtgttcttg gtgcccgtcc ggctgaacca
3001 gactgtcata tgggaccgcc cccaggtcac cttctccgag aacctctcga gtacgtgcca
3061 caccaaggag cgcttgccct ctcactccga ctttctggct gagcttcgga aggcccccgt
3121 ggtgaactgc tccatcgctg tctgccagag aatccagtgt gacatcccgt tctttggcat
3181 ccaggaagaa ttcaatgcta ccctcaaagg caacctctcg tttgactggt acatcaagac
3241 ctcgcataac cacctcctga tcgtgagcac agctgagatc ttgtttaacg attccgtgtt
3301 caccctgctg ccgggacagg gggcgtttgt gaggtcccag acggagacca aagtggagcc
3361 gttcgaggtc cccaaccccc tgccgctcat cgtgggcagc tctgtcgggg gactgctgct
3421 cctggccctc atcaccgccg cgctgtacaa gctcggcttc ttcaagcggc aatacaagga
3481 catgatgagt gaagggggtc ccccgggggc cgaaccccag tagcggctcc ttcccgacag
3541 agctgcctct cggtggccag caggactctg cccagaccac acgtagcccc caggctgctg
3601 gacacgtcgg acagcgaagt atccccgaca ggacgggctt gggct
//