LOCUS       BC096297                2036 bp    mRNA    linear   HUM 19-MAR-2007
DEFINITION  Homo sapiens collagen, type VIII, alpha 2, mRNA (cDNA clone
            IMAGE:40007336), partial cds.
ACCESSION   BC096297
VERSION     BC096297.1
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 2036)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 2036)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAY-2005) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Baylor Human Genome Sequencing Center
            cDNA Library Preparation: Baylor Human Genome Sequencing Center
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Sequencing Group at the Stanford Human Genome
            Center, Stanford University School of Medicine, Stanford, CA  94305
            Web site:       http://www-shgc.stanford.edu
            Contact:  (Dickson, Mark) mcd@paxil.stanford.edu
            Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
            R. M.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAM Plate: 2 Row: j Column: 6.
FEATURES             Location/Qualifiers
     source          1..2036
                     /db_xref="H-InvDB:HIT000335585"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="IMAGE:40007336"
                     /tissue_type="PCR rescued clones"
                     /clone_lib="NIH_MGC_283"
                     /note="Vector: pCR-Blunt II-TOPO with reversed insert;
                     Clone identification sequence tag: TACCAAT sequenced from
                     the forward primer"
     gene            <1..2036
                     /gene="COL8A2"
                     /gene_synonym="PPCD"
                     /gene_synonym="PPCD2"
                     /db_xref="GeneID:1296"
                     /db_xref="HGNC:HGNC:2216"
                     /db_xref="MIM:120252"
     CDS             <1..1974
                     /gene="COL8A2"
                     /gene_synonym="PPCD"
                     /gene_synonym="PPCD2"
                     /codon_start=1
                     /product="COL8A2 protein"
                     /protein_id="AAH96297.1"
                     /db_xref="GeneID:1296"
                     /db_xref="HGNC:HGNC:2216"
                     /db_xref="MIM:120252"
                     /translation="GRHAGDSDTPVFAAAAATEMPLPLLPMDLKGEPGPPGKPGPRGP
                     PGPPGFPGKPGMGKPGLHGQPGPAGPPGFSRMGKAGPPGLPGKVGPPGQPGLRGEPGI
                     RGDQGLRGPPGPPGLPGPSGITIPGKPGAQGVPGPPGFQGEPGPQGEPGPPGDRGLKG
                     DNGVGQPGLPGAPGQGGAPGPPGLPGPAGLGKPGLDGLPGAPGDKGESGPPGVPGPRG
                     EPGAVGPKGPPGVDGVGVPGAAGLPGPQGPSGAKGEPGTRGPPGLIGPTGYGMPGLPG
                     PKGDRGPAGVPGLLGDRGEPGEDGEPGEQGPQGLGGPPGLPGSAGLPGRRGPPGPKGE
                     AGPGGPPGVPGIRGDQGPSGLAGKPGVPGERGLPGAHGPPGPTGPKGEPGFTGRPGGP
                     GVAGALGQKGDLGLPGQPGLRGPSGIPGLQGPAGPIGPQGLPGLKGEPGLPGPPGEGR
                     AGEPGTAGPTGPPGVPGSPGITGPPGPPGPPGPPGAPGAFDETGIAGLHLPNGGVEGA
                     VLGKGGKPQFGLGELSAHATPAFTAVLTSPFPASGMPVKFDRTLYNGHSGYNPATGIF
                     TCPVGGVYYFAYHVHVKGTNVWVALYKNNVPATYTYDEYKKGYLDQASGGAVLQLRPN
                     DQVWVQMPSDQANGLYSTEYIHSSFSGFLLCPT"
BASE COUNT          329 a          670 c          729 g          308 t
ORIGIN      
        1 ggacgccatg ctggggactc tgacacccct gtcttcgctg ctgctgctgc tactgaaatg
       61 cctctaccgc tgctgccgat ggacctgaag ggagagcccg gcccccctgg gaagcccggg
      121 cctcggggtc cccctggccc ccctggcttc ccaggaaaac caggcatggg aaagccagga
      181 ctccatgggc agcctggccc tgctgggccc cctggcttct cccggatggg caaggctggt
      241 cccccagggc tccctggcaa ggtcgggcca ccagggcagc cggggcttcg gggggagcca
      301 ggaatacgag gggaccaggg cctccgggga cccccaggac cccctggcct cccgggcccc
      361 tcaggcatta ctatccctgg aaaaccaggt gcccaagggg tgccagggcc cccaggattc
      421 cagggggaac cagggcccca gggggagcct gggcccccag gtgatcgagg cctcaagggg
      481 gataatggag tgggccagcc cgggctgcct ggggccccag ggcagggggg tgcccccggc
      541 ccccccggcc tccctggtcc agctggctta ggcaaacctg gtttggatgg gcttcctggg
      601 gccccaggag acaagggtga gtctgggcct cctggagttc caggccccag gggggagcca
      661 ggagctgtgg gcccaaaagg acctcctgga gtagacggtg tgggagtccc aggggcagca
      721 gggttgccag gaccacaggg cccatcaggg gccaaagggg agccagggac ccggggcccc
      781 cctgggctga taggccccac tggctatggg atgccaggac tgccaggccc caagggggac
      841 aggggcccag ctggggtccc aggactcttg ggggacaggg gtgagccagg ggaggatggg
      901 gagccagggg agcagggccc acagggtctt gggggtcccc ctggacttcc tgggtctgca
      961 gggcttcctg gcagacgtgg gccccctggg cctaagggtg aggcagggcc tggaggaccc
     1021 ccaggagtgc ctggcattcg aggtgaccag gggcctagtg gcctggctgg gaaaccaggg
     1081 gtcccaggtg agaggggact tcctggggcc catggacccc ctggaccaac tgggcccaag
     1141 ggtgagccgg gtttcacggg tcgccctgga ggaccagggg tggcaggagc cctggggcag
     1201 aaaggtgact tggggctccc tgggcagcct ggcctgaggg gtccctcagg aatcccagga
     1261 ctccagggtc cagctggccc tattgggccc caaggcctgc cgggcctgaa gggggaacca
     1321 ggcctgccag ggccccctgg agaggggaga gcaggggaac ctggcacggc tgggcccacg
     1381 gggcccccag gggtccctgg ctcccctgga atcacgggcc ctccggggcc tcccgggccc
     1441 ccgggacccc ctggtgcccc tggggccttc gatgagactg gcatcgcagg cttgcacctg
     1501 cccaacggcg gtgtggaggg tgccgtgctg ggcaaggggg gcaagccaca gtttgggctg
     1561 ggcgagctgt ctgcccatgc cacaccggcc ttcactgcgg tgctcacctc gcccttcccc
     1621 gcctcgggca tgcccgtgaa atttgaccgg actctctaca atggccacag cggctacaac
     1681 ccagccactg gcatcttcac ctgccctgtg ggcggcgtct actactttgc ttaccatgtg
     1741 cacgtcaagg gcaccaacgt gtgggtggcc ctgtacaaga acaacgtgcc ggccacctat
     1801 acctacgatg agtacaagaa gggctacctg gaccaggcat ctggtggggc cgtgctccag
     1861 ctgcggccca acgaccaggt ctgggtgcag atgccgtcgg accaggccaa cggcctctac
     1921 tccacggagt acatccactc ctccttttca ggattcttgc tctgccccac ataacccgcg
     1981 gggggtgtcc tgctgccctg gcctcctccc ctttagtggt agagcgacct tttcaa
//