LOCUS       BC096295                 836 bp    mRNA    linear   HUM 04-OCT-2006
DEFINITION  Homo sapiens collagen, type VIII, alpha 2, mRNA (cDNA clone
            IMAGE:40007332), complete cds.
ACCESSION   BC096295
VERSION     BC096295.1
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 836)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 836)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAY-2005) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Baylor Human Genome Sequencing Center
            cDNA Library Preparation: Baylor Human Genome Sequencing Center
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Sequencing Group at the Stanford Human Genome
            Center, Stanford University School of Medicine, Stanford, CA  94305
            Web site:       http://www-shgc.stanford.edu
            Contact:  (Dickson, Mark) mcd@paxil.stanford.edu
            Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
            R. M.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAM Plate: 2 Row: i Column: 5
            This clone has the following problem: The cds is short compared to
            the longest cds in the locus.
FEATURES             Location/Qualifiers
     source          1..836
                     /db_xref="H-InvDB:HIT000335583"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="IMAGE:40007332"
                     /tissue_type="PCR rescued clones"
                     /clone_lib="NIH_MGC_283"
                     /note="Vector: pCR-Blunt II-TOPO with reversed insert;
                     Clone identification sequence tag: CTCCTATA sequenced from
                     the forward primer"
     gene            1..836
                     /gene="COL8A2"
                     /gene_synonym="FLJ00201"
                     /gene_synonym="PPCD"
                     /gene_synonym="PPCD2"
                     /db_xref="GeneID:1296"
                     /db_xref="HGNC:HGNC:2216"
                     /db_xref="MIM:120252"
     CDS             430..774
                     /gene="COL8A2"
                     /gene_synonym="FLJ00201"
                     /gene_synonym="PPCD"
                     /gene_synonym="PPCD2"
                     /codon_start=1
                     /product="COL8A2 protein"
                     /protein_id="AAH96295.1"
                     /db_xref="GeneID:1296"
                     /db_xref="HGNC:HGNC:2216"
                     /db_xref="MIM:120252"
                     /translation="MPVKFDRTLYNGHSGYNPATGIFTCPVGGVYYFAYHVHVKGTNV
                     WVALYKNNVPATYTYDEYKKGYLDQASGGAVLQLRPNDQVWVQMPSDQANGLYSTEYI
                     HSSFSGFLLCPT"
BASE COUNT          130 a          283 c          261 g          162 t
ORIGIN      
        1 ggacgccatg ctggggactc tgacacccct gtcttcgctg ctgctgctgc tactggtgct
       61 ggtgctgggg tgtgggccgc gggcgtcctc tggtggcggg gccggtgggg cggcgggcta
      121 tgccccagtg aagtacatcc agcccatgca gaaaggacct gtgggaccgc ccttccgtga
      181 gggcaaaggc cagtacctgg ctcccctgga atcacgggcc ctccggggcc tcccgggccc
      241 ccgggacccc ctggtgcccc tggggccttc gatgagactg gcatcgcagg cttgcacctg
      301 cccaacggcg gtgtggaggg tgccgtgctg ggcaaggggg gcaagccaca gtttgggctg
      361 ggcgagctgt ctgcccatgc cacaccggcc ttcactgcgg tgctcacctc gcccttcccc
      421 gcctcgggca tgcccgtgaa atttgaccgg actctctaca atggccacag cggctacaac
      481 ccagccactg gcatcttcac ctgccctgtg ggcggcgtct actactttgc ttaccatgtg
      541 cacgtcaagg gcaccaacgt gtgggtggcc ctgtacaaga acaacgtgcc ggccacctat
      601 acctacgatg agtacaagaa gggctacctg gaccaggcat ctggtggggc cgtgctccag
      661 ctgcggccca acgaccaggt ctgggtgcag atgccgtcgg accaggccaa cggcctctac
      721 tccacggagt acatccactc ctccttttca ggattcttgc tctgccccac ataacccgcg
      781 gggggtgtcc tgctgccctg gcctcctccc ctttagtggt agagcgacct tttcaa
//