LOCUS BC096240 1479 bp mRNA linear HUM 03-NOV-2008 DEFINITION Homo sapiens heparan sulfate 6-O-sulfotransferase 1, mRNA (cDNA clone MGC:116900 IMAGE:40005547), complete cds. ACCESSION BC096240 VERSION BC096240.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1479) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1479) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (12-MAY-2005) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Baylor Human Genome Sequencing Center cDNA Library Preparation: Baylor Human Genome Sequencing Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAM Plate: 2 Row: n Column: 15. FEATURES Location/Qualifiers source 1..1479 /db_xref="H-InvDB:HIT000335528" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:116900 IMAGE:40005547" /tissue_type="PCR rescued clones" /clone_lib="NIH_MGC_283" /note="Vector: pCR-Blunt II-TOPO with reversed insert; Clone identification sequence tag: CAATTAT sequenced from the forward primer" gene 1..1479 /gene="HS6ST1" /db_xref="GeneID:9394" /db_xref="HGNC:HGNC:5201" /db_xref="MIM:604846" CDS 11..1246 /gene="HS6ST1" /codon_start=1 /product="heparan sulfate 6-O-sulfotransferase 1" /protein_id="AAH96240.4" /db_xref="GeneID:9394" /db_xref="HGNC:HGNC:5201" /db_xref="MIM:604846" /translation="MRRRRAGGRTMVERASKFVLVVAGSVCFMLILYQYAGPGLSLGA PGGRAPPDDLDLFPTPDPHYEKKYYFPVRELERSLRFDMKGDDVIVFLHIQKTGGTTF GRHLVQNVRLEVPCDCRPGQKKCTCYRPNRRETWLFSRFSTGWSCGLHADWTELTNCV PGVLDRRDSAALRTPRKFYYITLLRDPVSRYLSEWRHVQRGATWKTSLHMCDGRTPTP EELPPCYEGTDWSGCTLQEFMDCPYNLANNRQVRMLADLSLVGCYNLSFIPEGKRAQL LLESAKKNLRGMAFFGLTEFQRKTQYLFERTFNLKFIRPFMQYNSTRAGGVEVDEDTI RRIEELNDLDMQLYDYAKDLFQQRYQYKRQLERREQRLRSREERLLHRAKEALPREDA DEPGRVPTEDYMSHIIEKW" BASE COUNT 289 a 467 c 496 g 227 t ORIGIN 1 atggtgacac atgcggcggc ggcgcgccgg cggcaggacc atggttgagc gcgccagcaa 61 gttcgtgctg gtggtggcgg gctcggtgtg cttcatgctc atcttgtacc agtacgcggg 121 cccaggactg agcctgggcg cgcccggcgg ccgcgcgccg cccgacgacc tggacctgtt 181 ccccacaccc gacccccact acgagaagaa gtactacttc ccggtccgcg agctggagcg 241 ctcgctgcgc ttcgacatga agggcgacga cgtgatcgtc ttcctgcaca tccagaagac 301 gggcggcacc acctttggcc gccacctcgt gcagaacgta cgcctcgagg tgccgtgcga 361 ctgccggccc ggccagaaga agtgcacctg ctaccggcct aaccgccgcg agacttggct 421 cttctcccgc ttctccaccg gctggagctg cgggctgcac gccgactgga ccgagctcac 481 caactgcgtg cccggcgtgc tggaccgccg cgactccgcc gcgctgcgca cgcccaggaa 541 gttctactac atcaccctgc tacgagaccc cgtgtcccgc tacctgagcg agtggcggca 601 tgtgcagagg ggtgccacgt ggaagacgtc gttgcatatg tgtgatgggc gcacgcccac 661 gcctgaggag ctgccgccct gctacgaggg cacggactgg tcgggctgca cgctacagga 721 gttcatggac tgcccgtaca acctggccaa caaccgccag gtgcgcatgc tggccgacct 781 gagcctggtg ggctgctaca acctgtcctt catccccgag ggcaagcggg cccagctgct 841 gctcgagagc gccaagaaga acctgcgggg catggccttc ttcggcctga ccgagttcca 901 gcgcaagacg cagtacctgt tcgagcggac gttcaacctc aagttcatcc ggcccttcat 961 gcagtacaat agcacgcggg cgggcggcgt ggaggtggat gaagacacca tccggcgcat 1021 cgaggagctc aacgacctgg acatgcagct gtacgactac gccaaggacc tcttccagca 1081 gcgctaccag tacaagcggc agctggagcg cagggagcag cgcctgagga gccgcgagga 1141 gcgtctgctg caccgggcca aggaggcact gccgcgggag gatgccgacg agccgggccg 1201 cgtgcccacc gaggactaca tgagccacat cattgagaag tggtagtggc ggtggtggcc 1261 acggggaggc ctcttggggg gtgtggggga taaaacagga cagacgacag gtccacccaa 1321 gactgtcaag ggatgagcat cccaaacctg ctccacagag gtagctgcgt cctgaaaaaa 1381 aacagagcag ggatgtagtg gggctgggca gggatggggg cttgagaaat caacaggtgc 1441 agcccagtgg gtcagaggaa agcgtgctcg aaggatgct //