LOCUS BC096217 1194 bp mRNA linear HUM 04-OCT-2006
DEFINITION Homo sapiens serpin peptidase inhibitor, clade B (ovalbumin),
member 10, mRNA (cDNA clone MGC:116870 IMAGE:40004824), complete
cds.
ACCESSION BC096217
VERSION BC096217.3
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1194)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1194)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-MAY-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Jun 29, 2006 this sequence version replaced BC096217.2.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 2 Row: m Column: 13.
FEATURES Location/Qualifiers
source 1..1194
/db_xref="H-InvDB:HIT000335505"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:116870 IMAGE:40004824"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_282"
/note="Vector: pCR-Blunt II-TOPO; Clone identification
sequence tag: TGTACCAA sequenced from the reverse primer"
gene 1..1194
/gene="SERPINB10"
/gene_synonym="bomapin"
/db_xref="GeneID:5273"
/db_xref="HGNC:HGNC:8942"
/db_xref="MIM:602058"
CDS 1..1194
/gene="SERPINB10"
/gene_synonym="bomapin"
/codon_start=1
/product="serpin peptidase inhibitor, clade B (ovalbumin),
member 10"
/protein_id="AAH96217.1"
/db_xref="GeneID:5273"
/db_xref="HGNC:HGNC:8942"
/db_xref="MIM:602058"
/translation="MDSLATSINQFALELSKKLAESAQGKNIFFSSWSISTSLTIVYL
GAKGTTAAQMAQVLQFNRDQGVKCDPESEKKRKMEFNLSNSEEIHSDFQTLISEILKP
NDDYLLKTANAIYGEKTYAFHNKYLEDMKTYFGAEPQPVNFVEASDQIRKDINSWVER
QTEGKIQNLLPDDSVDSTTRMILVNALYFKGIWEHQFLVQNTTEKPFRINETTSKPVQ
MMFMKKKLHIFHIEKPKAVGLQLYYKSRDLSLLILLPEDINGLEQLEKAITYEKLNEW
TSADMMELYEVQLHLPKFKLEDSYDLKSTLSSMGMSDAFSQSKADFSGMSSARNLFLS
NVFHKAFVEINEQGTEAAAGSGSEINIRIRVPSIEFNANHPFLFFIRHNKTNTILFYG
RLCSP"
BASE COUNT 403 a 259 c 238 g 294 t
ORIGIN
1 atggactctc tagcaacatc aatcaaccag tttgccctgg agttgagcaa aaagctagct
61 gaatctgctc agggtaaaaa tatcttcttt tcttcctgga gcatctcaac ttccttgacc
121 atagtgtatt tgggcgccaa aggtaccact gcagcccaaa tggcccaggt gcttcaattt
181 aacagagacc agggagtcaa atgtgaccct gaaagtgaaa aaaaaaggaa aatggaattc
241 aacttgagca actcggaaga aatacactct gatttccaaa cacttatctc agaaatcctc
301 aagcccaacg atgactactt acttaaaaca gccaatgcga tatatggaga gaaaacgtat
361 gcatttcaca ataaatattt agaagacatg aaaacatatt ttggtgcaga acctcagcct
421 gttaactttg tggaagcttc tgatcaaatc agaaaggaca tcaactcttg ggttgaaaga
481 cagaccgagg gtaaaatcca gaatctcctg cctgatgact ctgtggattc cacaaccagg
541 atgattctgg tgaacgccct atactttaaa ggaatctggg aacatcaatt cttagtgcaa
601 aacaccacag aaaagccttt tagaataaac gagactacaa gcaaaccagt gcaaatgatg
661 tttatgaaga aaaagcttca catttttcac atagaaaagc caaaagcagt gggccttcaa
721 ctctactaca aaagccgtga cctcagcctg cttatactac tgccagaaga cattaatggg
781 ctggaacagc tggaaaaggc catcacctat gagaagctga atgagtggac cagtgcagac
841 atgatggagt tgtatgaagt gcagctacac cttcccaagt tcaagctgga agacagttat
901 gatctcaagt caaccctgag cagtatgggg atgagtgatg ccttcagcca aagcaaagct
961 gatttctcag gaatgtcttc agcaagaaac ctatttttgt ccaatgtttt ccataaggct
1021 tttgtggaaa taaatgaaca aggtactgaa gctgcagctg gcagtgggag tgagataaat
1081 atacgaatta gagtcccatc cattgaattc aatgcaaatc acccattcct cttcttcatc
1141 aggcacaata aaaccaacac cattcttttt tatggaagat tatgctcccc ctaa
//