LOCUS BC096102 2541 bp mRNA linear HUM 04-OCT-2006
DEFINITION Homo sapiens NEL-like 1 (chicken), mRNA (cDNA clone MGC:116744
IMAGE:40001478), complete cds.
ACCESSION BC096102
VERSION BC096102.3
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2541)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2541)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-MAY-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Jun 29, 2006 this sequence version replaced BC096102.2.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 2 Row: b Column: 21.
FEATURES Location/Qualifiers
source 1..2541
/db_xref="H-InvDB:HIT000335390"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:116744 IMAGE:40001478"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_282"
/note="Vector: pCR-Blunt II-TOPO; Clone identification
sequence tag: CATCCTTA sequenced from the reverse primer"
gene 1..2541
/gene="NELL1"
/gene_synonym="IDH3GL"
/gene_synonym="NRP1"
/db_xref="GeneID:4745"
/db_xref="HGNC:HGNC:7750"
/db_xref="MIM:602319"
CDS 64..2496
/gene="NELL1"
/gene_synonym="IDH3GL"
/gene_synonym="NRP1"
/codon_start=1
/product="NEL-like 1 (chicken)"
/protein_id="AAH96102.1"
/db_xref="GeneID:4745"
/db_xref="HGNC:HGNC:7750"
/db_xref="MIM:602319"
/translation="MPMDLILVVWFCVCTARTVVGFGMDPDLQMDIVTELDLVNTTLG
VAQVSGMHNASKAFLFQDIEREIHAAPHVSEKLIQLFRNKSEFTILATVQQKPSTSGV
ILSIRELEHSYFELESSGLRDEIRYHYIHNGKPRTEALPYRMADGQWHKVALSVSASH
LLLHVDCNRIYERVIDPPDTNLPPGINLWLGQRNQKHGLFKGIIQDGKIIFMPNGYIT
QCPNLNHTCPTCSDFLSLVQGIMDLQELLAKMTAKLNYAETRLSQLENCHCEKTCQVS
GLLYRDQDSWVDGDHCRNCTCKSGAVECRRMSCPPLNCSPDSLPVHIAGQCCKVCRPK
CIYGGKVLAEGQRILTKSCRECRGGVLVKITEMCPPLNCSEKDHILPENQCCRVCRGH
NFCAEGPKCGENSECKNWNTKATCECKSGYISVQGDSAYCEDIDECAAKMHYCHANTV
CVNLPGLYRCDCVPGYIRVDDFSCTEHDECGSGQHNCDENAICTNTVQGHSCTCKPGY
VGNGTICRAFCEEGCRYGGTCVAPNKCVCPSGFTGSHCEKDIDECSEGIIECHNHSRC
VNLPGWYHCECRSGFHDDGTYSLSGESCIDIDECALRTHTCWNDSACINLAGGFDCLC
PSGPSCSGDCPHEGGLKHNGQVWTLKEDRCSVCSCKDGKIFCRRTACDCQNPSADLFC
CPECDTRVTSQCLDQNGHKLYRSGDNWTHSCQQCRCLEGEVDCWPLTCPNLSCEYTAI
LEGECCPRCVSDPCLADNITYDIRKTCLDSYGVSRLSGSVWTMAGSPCTTCKCKNGRV
CCSVDFECLQNN"
BASE COUNT 666 a 574 c 661 g 640 t
ORIGIN
1 tccaggctca tttgcttcca cctagcttcg gtgccccctg ctaggcgggg accctcgaga
61 gcgatgccga tggatttgat tttagttgtg tggttctgtg tgtgcactgc caggacagtg
121 gtgggctttg ggatggaccc tgaccttcag atggatatcg tcaccgagct tgaccttgtg
181 aacaccaccc ttggagttgc tcaggtgtct ggaatgcaca atgccagcaa agcattttta
241 tttcaagaca tagaaagaga gatccatgca gctcctcatg tgagtgagaa attaattcag
301 ctgttccgga acaagagtga attcaccatt ttggccactg tacagcagaa gccatctact
361 tcaggagtga tactgtccat tcgagaactg gagcacagct attttgaact ggagagcagt
421 ggcctgaggg atgagattcg gtatcactac atacacaatg ggaagccaag gacagaggca
481 cttccttacc gcatggcaga tggacaatgg cacaaggttg cactgtcagt tagcgcctct
541 catctcctgc tccatgtcga ctgtaacagg atttatgagc gtgtgataga ccctccagat
601 accaaccttc ccccaggaat caatttatgg cttggccagc gcaaccaaaa gcatggctta
661 ttcaaaggga tcatccaaga tgggaagatc atctttatgc cgaatggata tataacacag
721 tgtccaaatc taaatcacac ttgcccaacc tgcagtgatt tcttaagcct ggtgcaagga
781 ataatggatt tacaagagct tttggccaag atgactgcaa aactaaatta tgcagagaca
841 agacttagtc aattggaaaa ctgtcattgt gagaagactt gtcaagtgag tggactgctc
901 tatcgagatc aagactcttg ggtagatggt gaccattgca ggaactgcac ttgcaaaagt
961 ggtgccgtgg aatgccgaag gatgtcctgt ccccctctca attgctcccc agactccctc
1021 ccagtgcaca ttgctggcca gtgctgtaag gtctgccgac caaaatgtat ctatggagga
1081 aaagttcttg cagaaggcca gcggatttta accaagagct gtcgggaatg ccgaggtgga
1141 gttttagtaa aaattacaga aatgtgtcct cctttgaact gctcagaaaa ggatcacatt
1201 cttcctgaga atcagtgctg ccgtgtctgt agaggtcata acttttgtgc agaaggacct
1261 aaatgtggtg aaaactcaga gtgcaaaaac tggaatacaa aagctacttg tgagtgcaag
1321 agtggttaca tctctgtcca gggagactct gcctactgtg aagatattga tgagtgtgca
1381 gctaagatgc attactgtca tgccaatact gtgtgtgtca accttcctgg gttatatcgc
1441 tgtgactgtg tcccaggata cattcgtgtg gatgacttct cttgtacaga acacgatgaa
1501 tgtggcagcg gccagcacaa ctgtgatgag aatgccatct gcaccaacac tgtccaggga
1561 cacagctgca cctgcaaacc gggctacgtg gggaacggga ccatctgcag agctttctgt
1621 gaagagggct gcagatacgg tggaacgtgt gtggctccca acaaatgtgt ctgtccatct
1681 ggattcacag gaagccactg cgagaaagat attgatgaat gttcagaggg aatcattgag
1741 tgccacaacc attcccgctg cgttaacctg ccagggtggt accactgtga gtgcagaagc
1801 ggtttccatg acgatgggac ctattcactg tccggggagt cctgtattga cattgatgaa
1861 tgtgccttaa gaactcacac ctgttggaac gattctgcct gcatcaacct ggcagggggt
1921 tttgactgtc tctgcccctc tgggccctcc tgctctggtg actgtcctca tgaagggggg
1981 ctgaagcaca atggccaggt gtggaccttg aaagaagaca ggtgttctgt ctgctcctgc
2041 aaggatggca agatattctg ccgacggaca gcttgtgatt gccagaatcc aagtgctgac
2101 ctattctgtt gcccagaatg tgacaccaga gtcacaagtc aatgtttaga ccaaaatggt
2161 cacaagctgt atcgaagtgg agacaattgg acccatagct gtcagcagtg tcggtgtctg
2221 gaaggagagg tagattgctg gccactcact tgccccaact tgagctgtga gtatacagct
2281 atcttagaag gggaatgttg tccccgctgt gtcagtgacc cctgcctagc tgataacatc
2341 acctatgaca tcagaaaaac ttgcctggac agctatggtg tttcacggct tagtggctca
2401 gtgtggacga tggctggatc tccctgcaca acctgtaaat gcaagaatgg aagagtctgt
2461 tgttctgtgg attttgagtg tcttcaaaat aattgaagta tttacagtgg actcaacgca
2521 gaagaatgga cgaaatgacc a
//