LOCUS BC096095 1627 bp mRNA linear HUM 04-OCT-2006
DEFINITION Homo sapiens erythrocyte membrane protein band 4.2, mRNA (cDNA
clone IMAGE:40001242), complete cds.
ACCESSION BC096095
VERSION BC096095.4
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1627)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1627)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-MAY-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Jun 29, 2006 this sequence version replaced BC096095.3.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 2 Row: b Column: 18
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1627
/db_xref="H-InvDB:HIT000335383"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:40001242"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_282"
/note="Vector: pCR-Blunt II-TOPO; Clone identification
sequence tag: GGTTCCAC sequenced from the reverse primer"
gene 1..1627
/gene="EPB42"
/gene_synonym="PA"
/db_xref="GeneID:2038"
/db_xref="HGNC:HGNC:3381"
/db_xref="MIM:177070"
CDS 514..1590
/gene="EPB42"
/gene_synonym="PA"
/codon_start=1
/product="EPB42 protein"
/protein_id="AAH96095.1"
/db_xref="GeneID:2038"
/db_xref="HGNC:HGNC:3381"
/db_xref="MIM:177070"
/translation="MTRPALPQGYDGWQILHPSAPNGGGVLGSCDLVPVRAVKEGTLG
LTPAVSDLFAAINASCVVWKCCEDGTLELTDSNTKYVGNNISTKGVGSDRCEDITQNY
KYPEGSLQEKEVLERVEKEKMEREKDNGIRPPSLETASPLYLLLKAPSSLPLRGDAQI
SVTLVNHSEQEKAVQLAIGVQAVHYNGVLAAKLWRKKLHLTLSANLEKIITIGLFFSN
FERNPPENTFLRLTAMATHSESNLSCFAQEDIAICRPHLAIKMPEKAEQYQPLTASVS
LQNSLDAPMEDCVISILGRGLIHRERSYRFRSVWPENTMCAKFQFTPTHVGLQRLTVE
VDCNMFQNLTNYKSVTVVAPELSA"
BASE COUNT 397 a 459 c 440 g 331 t
ORIGIN
1 gcccagaagg agcccagaag catgcaggtt taaccagtac caggtggctc taatgctggg
61 gatctgttca ccatggttgg agtactgtga tgagccctcc ttacccatgc cctggaagct
121 gtcctgccca agggactcat actgacatcc acacatttcc ccaaacagct gcattttctc
181 aaggagcaga gggtcctgcc caccccgcag acccaggcca cccaggaagg ggccttgctg
241 aacaagcgcc ggggcagcgt gcccatcctg cggcagtggc tcaccggccg aggccgacct
301 gtgtatgatg gccaggcctg ggtgttggct gctgttgctt gcacagtgct gcgatgcctg
361 ggaatccctg cccgcgtggt gaccacgttt gcctcagcac agggcaccgg tgggcgtctt
421 ctcatagatg aatactataa tgaggaggga cttcagaacg gagaaggcca gagaggcaga
481 atctggatct tccagacttc cacagagtgc tggatgacgc ggcctgcctt gccccagggt
541 tatgatggat ggcagattct gcacccaagt gctcctaatg gaggtggagt cctggggtcc
601 tgtgatctgg tgccggtcag agcagtcaag gaggggacgc tggggctgac cccagcagtg
661 tcagaccttt ttgctgccat aaatgcctca tgtgtggtct ggaagtgctg tgaggatggg
721 acactggagt tgactgactc caacacaaag tatgttggca acaacatcag caccaagggt
781 gtgggcagtg accgctgcga ggacatcact cagaactaca agtatcctga agggtctctt
841 caggaaaaag aggtgctgga gagagtcgag aaagagaaaa tggaacgtga gaaagacaac
901 ggcatccgtc ctcccagtct cgagactgcc agtcctctgt acctgctctt gaaagcaccc
961 agctccctac ccctgagagg ggatgcccag atctcagtga cgctggttaa tcacagtgag
1021 caggagaagg cagtgcagct ggcaattggg gtccaggctg tacactacaa cggtgtcctt
1081 gctgccaagc tctggaggaa gaagctgcac ctcacgctca gtgccaacct ggaaaagata
1141 ataaccatcg gcctgttctt ctccaatttt gagcgaaacc cacccgagaa caccttcctt
1201 agactcaccg ccatggcaac acactctgaa tccaacctta gctgctttgc tcaggaagac
1261 attgccattt gtagaccaca ccttgccatc aagatgccag agaaagcaga gcagtatcaa
1321 cccctcacag cctcagtcag cctccagaac tccctagatg cccccatgga ggactgtgtg
1381 atctccatcc tgggaagggg gctcattcac agagagagga gctacagatt ccgttcagtg
1441 tggcctgaaa acaccatgtg tgccaagttc cagttcacgc caacacatgt ggggctccag
1501 agactcactg tggaagtgga ctgcaacatg ttccagaacc taaccaacta taaaagcgtc
1561 accgtggtag cccctgaact atcagcttaa acttccagct ctatcaccac tctcctgcca
1621 acccttg
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