LOCUS BC095485 3812 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens membrane protein, palmitoylated 5 (MAGUK p55 subfamily
member 5), mRNA (cDNA clone MGC:111529 IMAGE:30520451), complete
cds.
ACCESSION BC095485
VERSION BC095485.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3812)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3812)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-MAY-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Stefan Hansson
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 198 Row: l Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38570141.
FEATURES Location/Qualifiers
source 1..3812
/db_xref="H-InvDB:HIT000335278"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:111529 IMAGE:30520451"
/tissue_type="Placenta, normal"
/clone_lib="NIH_MGC_147"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3812
/gene="MPP5"
/gene_synonym="FLJ12615"
/gene_synonym="PALS1"
/db_xref="GeneID:64398"
/db_xref="HGNC:HGNC:18669"
/db_xref="MIM:606958"
CDS 662..2689
/gene="MPP5"
/gene_synonym="FLJ12615"
/gene_synonym="PALS1"
/codon_start=1
/product="membrane protein, palmitoylated 5 (MAGUK p55
subfamily member 5)"
/protein_id="AAH95485.1"
/db_xref="GeneID:64398"
/db_xref="HGNC:HGNC:18669"
/db_xref="MIM:606958"
/translation="MTTSHMNGHVTEESDSEVKNVDLASPEEHQKHREMAVDCPGDLG
TRMMPIRRSAQLERIRQQQEDMRRRREEEGKKQELDLNSSMRLKKLAQIPPKTGIDNP
MFDTEEGIVLESPHYAVKILEIEDLFSSLKHIQHTLVDSQSQEDISLLLQLVQNKDFQ
NAFKIHNAITVHMNKASPPFPLISNAQDLAQEVQTVLKPVHHKEGQELTALLNTPHIQ
ALLLAHDKVAEQEMQLEPITDERVYESIGQYGGETVKIVRIEKARDIPLGATVRNEMD
SVIISRIVKGGAAEKSGLLHEGDEVLEINGIEIRGKDVNEVFDLLSDMHGTLTFVLIP
SQQIKPPPAKETVIHVKAHFDYDPSDDPYVPCRELGLSFQKGDILHVISQEDPNWWQA
YREGDEDNQPLAGLVPGKSFQQQREAMKQTIEEDKEPEKSGKLWCAKKNKKKRKKVLY
NANKNDDYDNEEILTYEEMSLYHQPANRKRPIILIGPQNCGQNELRQRLMNKEKDRFA
SAVPHTTRSRRDQEVAGRDYHFVSRQAFEADIAAGKFIEHGEFEKNLYGTSIDSVRQV
INSGKICLLSLRTQSLRTLRNSDLKPYIIFIAPPSQERLRALLAKEGKNPKPEELREI
IEKTREMEQNNGHYFDTAIVNSDLDKAYQELLRLINKLDTEPQWVPSTWLR"
BASE COUNT 1165 a 710 c 905 g 1032 t
ORIGIN
1 gttttagact tagaggcgcg cgactgcgcg cacccggctg gagctgcgga gaggaccaat
61 gagcgggcgc tctctccgct ccggctcggg attgggcaag ccgcgccagc ctctcacggg
121 cggggtggga ctcggatccg cgcgcccact gcgccagagt cccgggggcg cgtgcgcggt
181 ctcgcggcgg ccgcaggggc cggtctcgcg cggtctagaa gtggagttgc tggcggctgc
241 ggcggtgacg gcggcgacgg aggaggcagg cggtggggcg ggggcgggga ctaaggattc
301 tgaggtgggg agtcgggagt ttctggattc tttatccgga atttcaaggg ccgccggagg
361 gctgtcgctt ctgcagtgcg taggagcggc cggggcggga ggctccgcgg agccgaggcg
421 tggagaataa gaaagccttg agttttgtga aaaaccggag aagagaaact aaaaggacag
481 tagaaaaggc ttttccagtt tgcataatat ttccttcatg gatacttttt catagcatta
541 ttatgtgatg tgagaagttt ttttttttga agtaacatgg attttatact acagaatcaa
601 gagaattggc ttataggaaa aattgattta taaaaagtgg tacaggtttt catagataac
661 catgacaaca tcccatatga atgggcatgt tacagaggaa tcagacagcg aagtaaaaaa
721 tgttgatctt gcatcaccag aggaacatca gaagcaccga gagatggctg ttgactgccc
781 tggagatttg ggcaccagga tgatgccaat acgtcgaagt gcacagttgg agcgtattcg
841 gcaacaacag gaggacatga ggcgtaggag agaggaagaa gggaaaaagc aagaacttga
901 ccttaattct tccatgagac ttaagaaact agcccaaatt cctccaaaga ccggaataga
961 taaccctatg tttgatacag aggaaggaat tgtcttagaa agtcctcatt atgctgtgaa
1021 aatattagaa atagaagact tgttttcttc acttaaacat atccaacata ctttggtaga
1081 ttctcagagc caggaggata tttcactgct tttacaactt gttcaaaata aggatttcca
1141 gaatgcattt aagatacaca atgccatcac agtacacatg aacaaggcca gtcctccatt
1201 tcctcttatc tccaacgcac aagatcttgc tcaagaggta caaactgttt tgaagccagt
1261 tcatcataag gaaggacaag aactaactgc tttgctgaat actccacata ttcaggcact
1321 tttactggcc cacgataagg ttgctgagca ggaaatgcag ctagagccca ttacagatga
1381 gagagtttat gaaagtattg gccagtatgg aggagaaact gtaaaaatag ttcgtataga
1441 aaaggctcgt gatattccgt tgggtgctac agttcgtaat gaaatggact ctgtcatcat
1501 tagccggata gtcaaagggg gtgctgcaga gaaaagtggt ctgttgcatg aaggagatga
1561 agttctagag attaatggca ttgaaattcg ggggaaagat gtcaatgagg tttttgactt
1621 gttgtctgat atgcatggta ctttgacttt tgtcctgatt cccagtcaac agatcaagcc
1681 gcctcctgcc aaggaaacag taatccatgt aaaagctcat tttgactatg acccctcaga
1741 tgacccttat gttccatgtc gagagttagg tctgtctttt caaaaaggtg atatacttca
1801 tgtgatcagt caagaagatc caaactggtg gcaggcctac agggaagggg acgaagataa
1861 tcaacctcta gccgggcttg ttccagggaa aagctttcag cagcaaaggg aagccatgaa
1921 acaaaccata gaagaagata aggagccaga aaaatcagga aaactgtggt gtgcaaagaa
1981 gaataaaaag aagaggaaaa aggttttata taatgccaat aaaaatgatg attatgacaa
2041 cgaggagatc ttaacctatg aggaaatgtc actttatcat cagccagcaa ataggaagag
2101 acctatcatc ttgattggtc cacagaactg tggccagaat gaattgcgtc agaggctcat
2161 gaacaaagaa aaggaccgct ttgcatctgc agttcctcat acaacccgga gtaggcgaga
2221 ccaagaagta gccggtagag attaccactt tgtttcgcgg caagcattcg aggcagacat
2281 agcagctgga aagttcattg agcatggtga atttgagaag aatttgtatg gaactagcat
2341 agattctgta cggcaagtga tcaactctgg caaaatatgt cttttaagtc ttcgtacaca
2401 gtcattgagg actctccgga attcagattt gaaaccatat attatcttca ttgcaccccc
2461 ttcacaagaa agacttcggg cattattggc caaagaaggc aagaatccaa agcctgaaga
2521 gttgagagaa atcattgaga agacaagaga gatggagcag aacaatggcc actactttga
2581 tacggcaatt gtgaattccg atcttgataa agcctatcag gaattgctta ggttaattaa
2641 caaacttgat actgaacctc agtgggtacc atccacttgg ctgaggtgaa agaaacatcc
2701 attctgtggc atgttggact tgatctggca aaaactgcca ataggaggac tgcccgacac
2761 tgcagcaaga ttgaggataa gatggaaggc agcagtataa gctgtagatc tgttcttaga
2821 tctcttgaat tagtgagacg acagttccct taggcagttt gtgcatggca tcctttattc
2881 tctatacatg gctttagcgg ttcttgcctc attttgggat tctaaatgga agctttcaac
2941 agagcattcc attttgtcct gttaaaacct tttgttttca cctaaaccct ttctgcttag
3001 ttgtatctct gtgaaaaact tgtatacaca agcgtccatg tctcacacaa atattgatgt
3061 gattattctt aagtgttaaa tcattaacac ttaaatgact tcattgggaa tattgagcag
3121 agggactgtg cttctatgca ctgggcaagg cagtatttgc ttaggaaact aatgtagtca
3181 tcagagatac tttcctaaaa aggaaaaata aaaaacaaaa tggtgccact ttgggttgaa
3241 gctactttgt taggcttgaa ttcatttata tgtcttttga ttcttaaaaa aacaaaaaac
3301 attccattag aagcaccagt ttttttgctc aaactttgtg gatcagactc tacactcaac
3361 acactctaat ctacttaaag gtatacaaaa tatgctgatc ttttttaaat tatgatttcc
3421 tgaatttttt tcttaagtcg tctcaactga tttactcact tagcttccct tccctcatca
3481 gcatagtata atagaatgta tgttacattt ttatgaatgg caggtgttca ttataatctg
3541 tattgactgt taaaaagttt cttcctcatg atgctaatag ttttttgtat acatgggagg
3601 atagcacatt tgacagtttt tgcattttta tgtatgagca cagtatccta tgactgtgct
3661 acgtatatat aggtaataaa ctggaattct gttgatgaat atagctgctg tactgtatat
3721 taatatttaa tagatcaaca aatggtcatt gaaaacactt gtttagcatt agaataaaat
3781 tatatatgtc cttgggaaaa aaaaaaaaaa aa
//