LOCUS BC095480 2694 bp mRNA linear HUM 23-AUG-2007
DEFINITION Homo sapiens von Willebrand factor A domain containing 3B, mRNA
(cDNA clone IMAGE:30390601), complete cds.
ACCESSION BC095480
VERSION BC095480.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2694)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2694)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-MAY-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Michael Brownstein
cDNA Library Preparation: Invitrogen Corp
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 196 Row: i Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 50355981
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..2694
/db_xref="H-InvDB:HIT000335273"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:30390601"
/tissue_type="Testis"
/clone_lib="NIH_MGC_180"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6.1"
gene 1..2694
/gene="VWA3B"
/db_xref="GeneID:200403"
/db_xref="HGNC:HGNC:28385"
CDS 220..2094
/gene="VWA3B"
/codon_start=1
/product="VWA3B protein"
/protein_id="AAH95480.1"
/db_xref="GeneID:200403"
/db_xref="HGNC:HGNC:28385"
/translation="MEKSGPSSTISEQQLQRQEGWINTKTDLAEQSLISSEKWLQLHG
LKSNKLTLKQILSQIGFPHCEDYVASLGRPVASRYADGLFPQLYRAEDGRVYNLTAKS
ELIYQFVEHLTQAVESYKQRMDWLTSKSRQIFGVILEQCVTIVLDFGGILEGELDLCR
EALTMVLQEQVAHITEFNIIRVSQEPVKWQENATPVTEQSIATAISWVEKLTVELTVS
EAGRLDALLEAGRDKTIESIYYFVVGDVPEESKELLLQRALEIPCPVYTVSFNARGEG
TIAFLKDLSAKTHSRFHAFAERTECVEFPAFSTKDGDNVMTWNSRKLKGKLPPGAGVR
EDVFLVWQEMEEACSTLAQIQRLVAEPPKPDVATVDCESETTSVEIASNPEDTWDSKT
WLQKYGLKAQKLSLYDVLADCSFRHADGVVDIKAKPENESVQTSAETNKKTVHAKYCS
RFVHAPWKDGSLVHVNITKEKCKWYSERIHTALARIRRRIKWLQDGSQSLFGRLHNDC
IYILIDTSHSMKSKLDLVKDKIIQFIQEQLKYKSKFNFVKFDGQAVAWREQLAEVNED
NLEQAQSWIRDIKIGSSTNTLSALKTAFADKETQAIYLLTDGRPDQGTSSHLLLTAAV
"
BASE COUNT 775 a 595 c 698 g 626 t
ORIGIN
1 gtcacagaga cctagaacag ctggaatcct tcgcccccgg cgcgcagcct tcgcccgccg
61 gaatcgctgc cttatccacc agcgggatgc ttacctcgcc cgccctctcg ggtcaggcgg
121 gcccgggagg atgggagggt ggctgctgag cgggagccgc cacgtcttcc acccgacata
181 ttgcctagag tttgctgtga cttagatctt gattcagaga tggagaaatc aggcccatct
241 tctaccatct ctgagcagca gctgcagagg caagagggat ggattaacac caaaacagac
301 ttggctgagc agagtctcat ttcatctgag aaatggcttc aactgcatgg gcttaagagc
361 aacaaattga ccttgaaaca gattttgtca cagatcggat tcccacattg tgaagattat
421 gtggcgtctc tggggagacc tgtggcttct cggtatgctg atggtctgtt tccacagctc
481 tacagagcag aagatggcag agtatacaat ctgacagcta aatcagaact gatttatcag
541 tttgtggaac atttaacaca agctgtggag agctacaagc agcgaatgga ctggctcacc
601 agcaagagcc ggcagatttt tggtgtcatc ttggaacagt gcgtcaccat agtgctggat
661 tttggcggca ttctggaggg ggagcttgat ctgtgccgag aggctctaac aatggttctc
721 caggagcagg tggctcacat aaccgagttc aatatcatac gggtttctca agagcctgtg
781 aagtggcagg aaaatgctac tcctgtgacc gaacagtcca tagctactgc catcagttgg
841 gttgagaaac tgacggttga gctgactgtg agcgaggctg gccgcctgga tgctctgctg
901 gaagccggga gagacaagac tattgaatcc atttactact ttgtggtggg ggatgttcct
961 gaagaatcca aggagcttct cctccagagg gccttggaga tcccgtgtcc agtctacaca
1021 gtgtccttca acgccagagg agaaggcact atagcttttc taaaggatct gagtgccaag
1081 acccacagca gattccacgc atttgccgag agaacagagt gtgtagaatt tcctgcattc
1141 tccacaaagg atggtgacaa tgtgatgact tggaattcaa ggaaactgaa aggaaaactc
1201 cctccaggag ctggagtcag agaggacgtg tttctcgttt ggcaagagat ggaggaagcc
1261 tgcagcacgc tggcccagat ccagaggctg gtggccgagc ctcccaagcc cgacgtggcc
1321 actgtggact gcgagtcaga aacaacctct gttgagattg catcgaatcc agaagacacc
1381 tgggactcta agacatggct gcagaaatat ggcttgaagg cccagaagct atccttgtat
1441 gatgtgcttg ccgactgctc tttccgccac gctgatgggg ttgtggatat aaaagccaaa
1501 ccggagaatg agtccgtgca gaccagtgcg gagacgaaca agaagacagt ccatgcaaaa
1561 tattgcagca ggtttgtcca tgctccctgg aaggatggga gcttggtcca cgtcaacatt
1621 accaaagaga agtgcaagtg gtacagtgag agaatccaca cagccctggc ccggatccga
1681 aggaggatta aatggctaca ggatgggagt caaagcctct ttggaagatt gcataatgat
1741 tgcatctaca ttctcattga cacgtctcac tcaatgaaga gcaaactgga cttggtgaag
1801 gacaagatca ttcagttcat acaggaacag ctgaaatata aaagtaagtt taactttgtg
1861 aagtttgatg gtcaagcagt tgcttggcgg gaacaacttg ctgaagtcaa tgaagataat
1921 ttggaacagg ctcagtcctg gattagagac ataaagattg gaagctccac aaacaccctg
1981 agtgccctga aaactgcttt tgctgataaa gaaacacagg caatctacct tctgaccgat
2041 gggagacctg atcagggaac atcatctcat ttactcctca cagcagccgt ttaaggaggg
2101 agtatcagtt ctgagccaca gatgaggaaa ctcacattag acaggacatg ccctaggcca
2161 ttcagatggg cagtgctgga tgagcttcaa gcccaagtct ctcgctctgg agctgtttcc
2221 ttcattccat acagctgaag acagcatgag tgggagagac tgtcatgtgt atcattccac
2281 ctgaaacagt tatagaccag gtcaaacgtt ttcaggaaat tcctatttat accatctcct
2341 tcaattacaa tgatgagatt gcaaacaggt ttttgaaaga ggttgctgct ttgactggag
2401 gagagttcca tttttataat tttggttgca aggatcccac tcccccagag gctgttcaga
2461 atgaagatgt gactctttta gttaaggaaa tggaacaggg tcacagtgat ctggagaaga
2521 tgcaagacct ttattctgag tccttgatca tggactggtg gtacaatgca gaaaaggatg
2581 gagacagcaa atattcaagt atcacagcct accctgccag gagatgtctt ttttatttca
2641 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaa
//