LOCUS BC095427 1440 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens ribosomal protein L4, mRNA (cDNA clone MGC:110964
IMAGE:30711782), complete cds.
ACCESSION BC095427
VERSION BC095427.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1440)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1440)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-MAY-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Thompson Lab, University of WI
cDNA Library Preparation: Chris Bradfield
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 220 Row: a Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 16579884.
FEATURES Location/Qualifiers
source 1..1440
/db_xref="H-InvDB:HIT000335220"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:110964 IMAGE:30711782"
/tissue_type="Embryonic Stem Cells, WA07 (H7) ES cell
line, passage 22, 2-5Kb average insert size"
/clone_lib="NIH_MGC_240"
/lab_host="DH10B"
/note="Vector: pCI-neo"
gene 1..1440
/gene="RPL4"
/db_xref="GeneID:6124"
/db_xref="HGNC:HGNC:10353"
/db_xref="MIM:180479"
CDS 50..1333
/gene="RPL4"
/codon_start=1
/product="ribosomal protein L4"
/protein_id="AAH95427.1"
/db_xref="GeneID:6124"
/db_xref="HGNC:HGNC:10353"
/db_xref="MIM:180479"
/translation="MACARPLISVYSEKGESSGKNVTLPAVFKAPIRPDIVNFVHTNL
RKNNRQPYAVSELAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMF
APTKTWRRWHRRVNTTQKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEG
YKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGII
KAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSN
YNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKT
MRRNTILRQARNHKLRVDKAAAAAAALQAKSDEKAAVAGKKPVVGKKGKKAAVGVKKQ
KKPLVGKKAAATKKPAPEKKPAEKKPTTEEKKPAA"
BASE COUNT 437 a 328 c 360 g 315 t
ORIGIN
1 tgtggcagca gccgggctga gaggagcgtg gctgtctcct ctctccgcca tggcgtgtgc
61 tcgcccactg atatcggtgt actccgaaaa gggggagtca tctggcaaaa atgtcacttt
121 gcctgctgta ttcaaggctc ctattcgacc agatattgtg aactttgttc acaccaactt
181 gcgcaaaaac aacagacagc cctatgctgt cagtgaatta gcaggtcatc agactagtgc
241 tgagtcttgg ggtactggca gagctgtggc tcgaattccc agagttcgag gtggtgggac
301 tcaccgctct ggccagggtg cttttggaaa catgtgtcgt ggaggccgaa tgtttgcacc
361 aaccaaaacc tggcgccgtt ggcatcgtag agtgaacaca acccaaaaac gatacgccat
421 ctgttctgcc ctggctgcct cagccctacc agcactggtc atgtctaaag gtcatcgtat
481 tgaggaagtt cctgaacttc ctttggtagt tgaagataaa gttgaaggct acaagaagac
541 caaggaagct gttttgctcc ttaagaaact taaagcctgg aatgatatca aaaaggtcta
601 tgcctctcag cgaatgagag ctggcaaagg caaaatgaga aaccgtcgcc gtatccagcg
661 caggggcccg tgcatcatct ataatgagga taatggtatc atcaaggcct tcagaaacat
721 ccctggaatt actctgctta atgtaagcaa gctgaacatt ttgaagcttg ctcctggtgg
781 gcatgtggga cgtttctgca tttggactga aagtgctttc cggaagttag atgaattgta
841 cggcacttgg cgtaaagccg cttccctcaa gagtaactac aatcttccca tgcacaagat
901 gattaataca gatcttagca gaatcttgaa aagcccagag atccaaagag cccttcgagc
961 accacgcaag aagatccatc gcagagtcct aaagaagaac ccactgaaaa acttgagaat
1021 catgttgaag ctaaacccat atgcaaagac catgcgccgg aacaccattc ttcgccaggc
1081 caggaatcac aagctccggg tggataaggc agctgctgca gcagcggcac tacaagccaa
1141 atcagatgag aaggcggcgg ttgcaggcaa gaagcctgtg gtaggtaaga aaggaaagaa
1201 ggctgctgtt ggtgttaaga agcagaagaa gcctctggtg ggaaaaaagg cagcagctac
1261 caagaaacca gcccctgaaa agaagcctgc agagaagaaa cctactacag aggagaagaa
1321 gcctgctgca taaactctta aatttgatta ttccataaag gtcaaatcat tttggacagc
1381 ttcttttgaa taaagacctg attatacagg cagtgagaaa caaaaaaaaa aaaaaaaaaa
//