LOCUS BC094823 1718 bp mRNA linear HUM 11-AUG-2008 DEFINITION Homo sapiens trafficking protein particle complex 10, mRNA (cDNA clone IMAGE:5925628), complete cds. ACCESSION BC094823 VERSION BC094823.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1718) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1718) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (06-MAY-2005) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Lou Staudt cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 62 Row: d Column: 14 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 48928028 This clone has the following problem: The cds is short compared to the longest cds in the locus. FEATURES Location/Qualifiers source 1..1718 /db_xref="H-InvDB:HIT000335124" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:5925628" /tissue_type="Lymph, lymphoma" /clone_lib="NIH_MGC_99" /lab_host="DH10B" /note="Vector: pOTB7" gene 1..1718 /gene="TRAPPC10" /gene_synonym="EHOC-1" /gene_synonym="EHOC1" /gene_synonym="GT334" /gene_synonym="TRS130" /gene_synonym="TRS30" /db_xref="GeneID:7109" /db_xref="HGNC:HGNC:11868" /db_xref="MIM:602103" CDS 148..978 /gene="TRAPPC10" /gene_synonym="EHOC-1" /gene_synonym="EHOC1" /gene_synonym="GT334" /gene_synonym="TRS130" /gene_synonym="TRS30" /codon_start=1 /product="trafficking protein particle complex 10" /protein_id="AAH94823.1" /db_xref="GeneID:7109" /db_xref="HGNC:HGNC:11868" /db_xref="MIM:602103" /translation="MDASEEPLPPVIYTMENKPIVTCAGDQNLFTSVYPTLSQQLPRE PMEWRRSYGRAPKMIHLESNFVQFKEELLPKEGNKALLTFPFLHIYWTECCDTEVYKA TVKDDLTKWQNVLKAHSSVDWLIVIVENDAKKKNKTNILPRTSIVDKIRNDFCNKQSD RCVVLSDPLKDSSRTQESWNAFLTKLRTLLLMSFTKNLGKFEDDMRTLREKRTEPGWS FCEYFMVQEELAFVFEMLQQFEDALVQYDELDALFSQYVVNFGAGGIKCPFHNSVACW " BASE COUNT 416 a 398 c 444 g 460 t ORIGIN 1 ggcggcagct gcggcgcaac cggctccgga gctgcctggc gcggccgggc gggcggcgcc 61 gctcaggctc gggctccggc tgggcccggc gcggcctcgg ggctgcccat ggggcgcggg 121 gggccgggcc ggtgacgccg gacgcccatg gacgcctctg aggagccgct gccgccggtg 181 atctacacca tggagaacaa gcccatcgtc acctgtgctg gagatcagaa tttatttacc 241 tctgtttatc caacgctctc tcagcagctt ccaagagaac caatggaatg gagaaggtcc 301 tatggccggg ctccgaagat gattcaccta gagtctaact ttgttcaatt caaagaggag 361 ctgctgccca aagaaggaaa caaagctctg ctcacgtttc ccttcctcca tatttactgg 421 acagagtgct gtgataccga agtgtataaa gctacagtaa aagatgacct caccaagtgg 481 cagaatgttc tgaaggctca tagctctgtg gactggttaa tagtgatagt tgaaaatgat 541 gccaagaaaa aaaacaaaac caacatcctt ccccgaacct ctattgtgga caaaataaga 601 aatgattttt gtaataaaca gagtgacagg tgtgttgtgc tctccgaccc cttgaaggac 661 tcttctcgaa ctcaggaatc ctggaatgcc ttcctgacca aactcaggac attgcttctt 721 atgtctttta ccaaaaacct aggcaagttt gaggatgaca tgagaacctt gagggagaag 781 aggactgagc caggctggag cttttgtgaa tatttcatgg ttcaggagga gcttgccttt 841 gttttcgaga tgctgcagca gttcgaggac gccctggtgc agtacgacga actggacgcc 901 ctcttctctc agtatgtggt caacttcggg gccgggggta taaaatgtcc tttccacaac 961 tcagtggcct gctggtgatg cttcgattct gtccctcgtt agaatcagag tggacgtccc 1021 tttgccttcc atccaggggt tatctttgga atgctcgagt gctcattgct gtgaacttat 1081 aaaatgccct tgggtgttca tctttctttt gcacttttaa ataatatctt aagctccttt 1141 acaattaaag aattagcaca gtgaaaccat acacagagag aaacattggt tattgtcctc 1201 agtgtttttc gctgatactt attttgatga aagtgatacc acgttatata gctgtttctc 1261 tgtcgctcct ttttgttact cacagcccat cctgggcatc tcttcaggtt agcaggtggg 1321 gtttggagtt gtttttgtta caattggtat tcctggcttg attccattac ctggtgttgg 1381 acattgggtt cttttatgct tcttgccacc acaagcagtg ctgtagtggg catctctgcc 1441 aggtgttctt tttgagaacc cttgtcacca tgtgtgaagg aaggagtaat tttgaggagc 1501 cctggtgtca gcaggagaac ctggagggag atgaagtgtg gggacggtca gttctagctg 1561 tgagcactgt cctcactctg gaactcatca gtggcgccga tggatactgg ctcatagtgc 1621 ttctgaagat caggtctgga tatctcactc tcctgagatg ccagtataga cacagaacca 1681 aagcaaagtg tttactaagt aaaaaaaaaa aaaaaaaa //