LOCUS BC094814 2101 bp mRNA linear HUM 17-NOV-2006
DEFINITION Homo sapiens MFNG O-fucosylpeptide
3-beta-N-acetylglucosaminyltransferase, mRNA (cDNA clone MGC:104794
IMAGE:5930073), complete cds.
ACCESSION BC094814
VERSION BC094814.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2101)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2101)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-MAY-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Lou Staudt
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 62 Row: d Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21536460.
FEATURES Location/Qualifiers
source 1..2101
/db_xref="H-InvDB:HIT000335115"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:104794 IMAGE:5930073"
/tissue_type="Lymph, lymphoma"
/clone_lib="NIH_MGC_99"
/lab_host="DH10B"
/note="Vector: pOTB7"
gene 1..2101
/gene="MFNG"
/db_xref="GeneID:4242"
/db_xref="HGNC:HGNC:7038"
/db_xref="MIM:602577"
CDS 225..1190
/gene="MFNG"
/codon_start=1
/product="MFNG O-fucosylpeptide
3-beta-N-acetylglucosaminyltransferase"
/protein_id="AAH94814.1"
/db_xref="GeneID:4242"
/db_xref="HGNC:HGNC:7038"
/db_xref="MIM:602577"
/translation="MQCRLPRGLAGALLTLLCMGLLCLRYHLNLSPQRVQGTPELSQP
NPGPPKLQLHDVFIAVKTTRAFHRLRLELLLDTWVSRTREQTFVFTDSPDKGLQERLG
SHLVVTNCSAEHSHPALSCKMAAEFDTFLASGLRWFCHVDDDNYVNPRALLQLLRAFP
LARDVYVGRPSLNRPIHASEPQPHNRTRLVQFWFATGGAGFCINRKLALKMAPWASGS
RFMDTSALIRLPDDCTMGYIIECKLGGRLQPSPLFHSHLETLQLLRTAQLPEQVTLSY
GVFEGKLNVIKLQGPFSPEEDPSRFRSLHCLLYPDTPWCPQLGAR"
BASE COUNT 400 a 641 c 606 g 454 t
ORIGIN
1 gcaggccgga cagcgggagc aggtggagga ctggcggcgg tcgagatcgt gctgccatgg
61 ctcagcctct gggtccagag cctcagctcc tacctcttcc ctccttgcca gcccctgatg
121 cctgccagac ttttgcctct gctggagccc ctgcctgacc agcttcccct ccctgtctgg
181 ttgggatttg ggggctgagc tgtctggggt cccagggcca accaatgcag tgccggctcc
241 cgcggggcct ggctggagcc ctcctcaccc tcctgtgcat ggggctcctg tgtctgcggt
301 accacttgaa cctgtccccg cagcgggtac aagggacccc cgagctgagc cagccgaacc
361 cggggccccc taagctacag ctacacgatg tcttcattgc agtgaagacg acccgggctt
421 tccaccgctt gcgcctggag ctgctgcttg acacgtgggt ttccaggacc agggaacaga
481 catttgtctt caccgacagc ccagacaaag gcctccagga gagactgggg tcccaccttg
541 tggtcaccaa ctgctccgcg gaacacagcc acccagctct gtcctgcaag atggctgctg
601 agttcgacac cttcttggcc agtgggctta ggtggttctg ccatgtggac gatgacaact
661 atgtgaaccc aagggcgctg ctgcagcttc tgagagcctt cccgctggcc cgcgacgtct
721 atgtgggaag gcccagcctg aaccggccca tccatgcctc agagccacag ccccacaacc
781 gcacgaggct ggtacagttc tggtttgcca ctgggggtgc tggcttctgc atcaatcgca
841 aactggcttt gaagatggct ccgtgggcca gtggctcccg tttcatggac acatctgctc
901 tcatccggct gcctgatgac tgcaccatgg gctatatcat tgagtgcaag ctgggcggcc
961 gcctgcagcc cagccccctc tttcactccc acctggagac cctgcagctg ctgaggactg
1021 cacagctccc agaacaggtc accctcagct acggtgtctt tgaggggaaa ctcaacgtca
1081 ttaagctaca gggccccttc tccccggagg aggacccctc cagatttcgc tccctccatt
1141 gtctgctcta tccagataca ccctggtgtc cccagctggg tgcccgatga atcctgaact
1201 gctgggcaaa ggttgggcag agacttctgg gtgtgccttg gctcccaagg tggcactgtg
1261 ggtccctggc aagtgtcttg tgataggcag tccctggcag ggccttcggg tggttggcaa
1321 gcccaggatc tgagtggcaa ttggcactga aggcacccca ggcccctggg aggtgagtta
1381 gacagcccag gggaccaggt ggaccaggtg gtggccagag aggctccagg ggctagactc
1441 cctcaggagg ctgaattgaa aaagggcagg gggcacttga gctgggctgg ggctcagggg
1501 tcctaaccct ttaggcagtg acatggcctc tgggtggggt ctggccgttg gccctggcta
1561 atgtctctca gtcattcccc tggggctcaa gcgctgggcc gcccactcct gcctccctca
1621 tctgtgtccc gagttcctga agggacatgg gtggaatgat ggcagaatcc agggtctgca
1681 gcacctgctg ttgttgccaa ccagtctccc aaagctcctt gctccccacc ccttgcgaac
1741 aggaccagat tttgtttgga gcctcagcat gccggggccc agatgatgga gcataacggg
1801 tcccagccaa ttgtgatgat cctttttgct catttcccag cctttcttgc tgttaggggc
1861 taccatggga ccagctctgg ccagagggaa ctaagcaaat ccaatagaga tgtttctggg
1921 gaaggttttg cagcccactc cccatcttcc tgctataaat gtgggtgtga tggctggatc
1981 tggggcagcc accttgctac catgaaggaa aggccaagac aatcatccac agctattccc
2041 tccagcatct ggttctgtac aaaaattaaa tgcttatttg tttaaaaaaa aaaaaaaaaa
2101 a
//