LOCUS BC094780 2491 bp mRNA linear HUM 12-JAN-2006
DEFINITION Homo sapiens vestigial like 3 (Drosophila), mRNA (cDNA clone
MGC:104691 IMAGE:30528902), complete cds.
ACCESSION BC094780
VERSION BC094780.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2491)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2491)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-MAY-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Stefan Hansson
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 198 Row: n Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 56550034.
FEATURES Location/Qualifiers
source 1..2491
/db_xref="H-InvDB:HIT000335081"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:104691 IMAGE:30528902"
/tissue_type="Placenta, normal"
/clone_lib="NIH_MGC_147"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2491
/gene="VGLL3"
/gene_synonym="FLJ38507"
/gene_synonym="VGL-3"
/db_xref="GeneID:389136"
/db_xref="HGNC:HGNC:24327"
/db_xref="IMGT/GENE-DB:24327"
/db_xref="MIM:24327"
CDS 377..1339
/gene="VGLL3"
/gene_synonym="FLJ38507"
/gene_synonym="VGL-3"
/codon_start=1
/product="VGLL3 protein"
/protein_id="AAH94780.1"
/db_xref="GeneID:389136"
/db_xref="HGNC:HGNC:24327"
/db_xref="IMGT/GENE-DB:24327"
/db_xref="MIM:24327"
/translation="MSCAEVMYHPQPYGASQYLPNPMAATTCPTAYYQPAPQPGQQKK
LAVFSKMQDSLEVTLPSKQEEEDEEEEEEEKDQPAEMEYLNSRCVLFTYFQGDIGSVV
DEHFSRALGQAITLHPESAISKSKMGLTPLWRDSSALSSQRNSFPTSFWTSSYQPPPA
PCLGGVHPDFQVTGPPGTFSAADPSPWPGHNLHQTGPAPPPAVSESWPYPLTSQVSPS
YSHMHDVYMRHHHPHAHMHHRHRHHHHHHHPPAGSALDPSYGPLLMPSVHAARIPAPQ
CDITKTEPTTVTSATSAWAGAFHGTVDIVPSVGFDTGWSAMARS"
BASE COUNT 588 a 672 c 590 g 641 t
ORIGIN
1 ggctgcccga cccgggcctg ggctgtggct gtgactggcg ctgccgtggg cgccgcagcc
61 ctcgcgggag ccggacgcgg taatgcccca gcggcgcagc gggcggctgc gtccctgagc
121 cgctatataa gcgcggcagg gaacatccgg aggggctgaa gatgaaggtg cccgcgcatg
181 ggcccccgct gattgccagt ccctcccgac cccgcgcccc gcgcggagcc cgaggccgcc
241 gaggacccgc cttcgccgca gtagcagctg gagcagcgac agaggcggca gctgcggcgg
301 cggcggcgcc cgcgcccctc gcgccagcgc gtagagcggc ggcggcagct cgggggccgc
361 cactgccccg gctgccatga gttgtgcgga ggtgatgtat cacccccagc cttatggagc
421 gtcccagtat ctgcccaacc ccatggcagc gacaacctgc cccacagcct actatcagcc
481 ggcgccccaa cctggccagc agaagaagtt agcggtattc agcaagatgc aggactctct
541 ggaagtcacc cttcccagca aacaagagga ggaggatgag gaggaggagg aggaggagaa
601 agaccagcct gccgagatgg agtaccttaa ctctcgctgt gtccttttca cttatttcca
661 gggagacatt gggtcagtag tggatgaaca cttctcaaga gctttgggcc aagccatcac
721 cctccatcca gaatctgcca tttcaaaaag caagatgggg ctaacccccc tatggcgaga
781 cagctcagct ctctcaagcc agcggaatag tttcccaact tccttttgga ccagctctta
841 ccagccccca cctgcacctt gtttgggggg agttcatcct gacttccagg tcactggacc
901 ccctggcacc ttttctgcag ctgatcccag tccttggccg ggacacaacc tgcatcagac
961 tggcccagcc cctccccctg ctgtgtctga gtcctggcct tatcctttga catctcaggt
1021 gagcccatcc tacagccata tgcatgacgt gtacatgcgg caccaccacc ctcatgccca
1081 catgcaccac cgccaccgcc accatcatca ccatcaccac cctcctgctg gctctgccct
1141 ggatccatcc tatgggcctc tgctgatgcc ttcagtgcat gcggccagga ttcctgctcc
1201 ccagtgtgac atcacaaaga cagaaccaac tacagtcacc tctgctacct cagcatgggc
1261 tggagccttt catggaacag tagacatagt gcccagcgtg ggattcgata caggctggag
1321 tgcaatggcg agatcttgac tcactgcaac ctctgcctcc cgagttcaac caattgtcct
1381 gcctcagcca cctgagtagc tggaattaca ggcatctgcc accacgcccg gctaattttt
1441 tgtattttta gtagatagtc actattttga atagtgaagg ctggcttccc tattttgaat
1501 agtgaaggct ggcttcccta ttttgaatag tgaaggctgg cttccctatt ttggccaggc
1561 tggtctcaaa ctcctgacct cgtgatccac ctgcctcgga ctcccaaggt gctgggatta
1621 caggtgtgag ccactgtgtc cagccctcat gtacaaattt ttaagtaaat gtgtgtttaa
1681 ttctcttgga aatatatcta ggagtagaac tgtggggtta agagaacctc actttttatt
1741 ttatgtattt ctatattttt tgaatttttt tcaaagagca tatatatgca atttttaaaa
1801 tatttaaatt taaatttttg ttttttaaat ttttttttag tatttaaatt gttaagattc
1861 attacaacat attatagtag agtttgaggt ttggtaggca aaactgccat aggaatgaag
1921 taaggtggtc cattttttcc gaagggctga gtggtggtga ggacagtgag gtgcctctgg
1981 cacaaaattt aaaaggatcc atactgtgag ggctgtgcaa gtgtatgcca ccccatattt
2041 tgcacccagg gctccttatt cctctaacct ctgtcttggt gttgctttgc tgtcatgcga
2101 gctcactctt actttttgct ccctctgttg aacaggtatt acatacaggt accttgaaat
2161 gatcagtatg gtatgatcat aagtcatttg tatttgccct ccacgtgaaa aatgctcatc
2221 tttaccaaga ggctgttatc acaaatctca cattaggctt tttccctttc ctttatcagt
2281 ctttaaactg agtttcatgg gttccatagg aaaaatactc agaatgtgat aataagggct
2341 taattgaaaa aagaaaagat ctattatcaa atgaatttat ttacattgcc taccatatac
2401 ctcttagaga tcacagttcc ctatagcata taaaatgttt tatatattct tcagtaaaaa
2461 agcattttaa attgtaaaaa aaaaaaaaaa a
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