LOCUS BC094762 4231 bp mRNA linear HUM 17-JUL-2006 DEFINITION Homo sapiens plakophilin 2, mRNA (cDNA clone MGC:104640 IMAGE:30344248), complete cds. ACCESSION BC094762 VERSION BC094762.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 4231) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 4231) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (06-MAY-2005) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Dr. Stefan Hansson cDNA Library Preparation: Michael Brownstein / Ted Usdin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 198 Row: j Column: 13. FEATURES Location/Qualifiers source 1..4231 /db_xref="H-InvDB:HIT000335063" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:104640 IMAGE:30344248" /tissue_type="Placenta, normal" /clone_lib="NIH_MGC_147" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..4231 /gene="PKP2" /gene_synonym="ARVD9" /db_xref="GeneID:5318" /db_xref="HGNC:HGNC:9024" /db_xref="MIM:602861" CDS 39..2552 /gene="PKP2" /gene_synonym="ARVD9" /codon_start=1 /product="plakophilin 2" /protein_id="AAH94762.1" /db_xref="GeneID:5318" /db_xref="HGNC:HGNC:9024" /db_xref="MIM:602861" /translation="MAAPGAPAEYGYIRTVLGQQILGQLDSSSLALPSEAKLKLAGSS GRGGQTVKSLRIQEQVQQTLARKGRSSVGNGNLHRTSSVPEYVYNLHLVENDFVGGRS PVPKTYDMLKAGTTATYEGRWGRGTAQYSSQKSVEERSLRHPLRRLEISPDSSPERAH YTHSDYQYSQRSQAGHTLHHQESRRAALLVPPRYARSEIVGVSRAGTTSRQRHFDTYH RQYQHGSVSDTVFDSIPANPALLTYPRPGTSRSMGNLLEKENYLTAGLTVGQVRPLVP LQPVTQNRASRSSWHQSSFHSTRTLREAGPSVAVDSSGRRAHLTVGQAAAGGSGNLLT ERSTFTDSQLGNADMEMTLERAVSMLEADHMPPSRISAAATFIQHECFQKSEARKRVN QLRGILKLLQLLKVQNEDVQRAVCGALRNLVFEDNDNKLEVAELNGVPRLLQVLKQTR DLETKKQITGLLWNLSSNDKLKNLMITEALLTLTENIIIPFSGWPEGDYPKANGLLDF DIFYNVTGCLRNMSSAGADGRKAMRRCDGLIDSLVHYVRGTIADYQPDDKATENCVCI LHNLSYQLEAELPEKYSQNIYIQNRNIQTDNNKSIGCFGSRSRKVKEQYQDVPMPEEK SNPKGVEWLWHSIVIRMYLSLIAKSVRNYTQEASLGALQNLTAGSGPMPTSVAQTVVQ KESGLQHTRKMLHVGDPSVKKTAISLLRNLSRNLSLQNEIAKETLPDLVSIIPDTVPS TDLLIETTASACYTLNNIIQNSYQNARDLLNTGGIQKIMAISAGDAYASNKASKAASV LLYSLWAHTELHHAYKKAQFKKTDFVNSRTAKAYHSLKD" BASE COUNT 1252 a 986 c 954 g 1039 t ORIGIN 1 agaggcaggc gagcagctcg gtcgccccca ccggccccat ggcagccccc ggcgccccag 61 ctgagtacgg ctacatccgg accgtcctgg gccagcagat cctgggacaa ctggacagct 121 ccagcctggc gctgccctcc gaggccaagc tgaagctggc ggggagcagc ggccgcggcg 181 gccagacagt caagagcctg cggatccagg agcaggtgca gcagaccctc gcccggaagg 241 gccgcagctc cgtgggcaac ggaaatcttc accgaaccag cagtgttcct gagtatgtct 301 acaacctaca cttggttgaa aatgattttg ttggaggccg ttcccctgtt cctaaaacct 361 atgacatgct aaaggctggc acaactgcca cttatgaagg tcgctgggga agaggaacag 421 cacagtacag ctcccagaag tccgtggaag aaaggtcctt gaggcatcct ctgaggagac 481 tggagatttc tcctgacagc agcccggaga gggctcacta cacgcacagc gattaccagt 541 acagccagag aagccaggct gggcacaccc tgcaccacca agaaagcagg cgggccgccc 601 tcctagtgcc accgagatat gctcgttccg agatcgtggg ggtcagccgt gctggcacca 661 caagcaggca gcgccacttt gacacatacc acagacagta ccagcatggc tctgttagcg 721 acaccgtttt tgacagcatc cctgccaacc cggccctgct cacgtacccc aggccaggga 781 ccagccgcag catgggcaac ctcttggaga aggagaacta cctgacggca gggctcactg 841 tcgggcaggt caggccgctg gtgcccctgc agcccgtcac tcagaacagg gcttccaggt 901 cctcctggca tcagagctcc ttccacagca cccgcacgct gagggaagct gggcccagtg 961 tcgccgtgga ttccagcggg aggagagcgc acttgactgt cggccaggcg gccgcagggg 1021 gaagtgggaa tctgctcact gagagaagca ctttcactga ctcccagctg gggaatgcag 1081 acatggagat gactctggag cgagcagtga gtatgctcga ggcagaccac atgccgccat 1141 ccaggatttc tgctgcagct actttcatac agcacgagtg cttccagaaa tctgaagctc 1201 ggaagagggt taaccagctt cgtggcatcc tcaagcttct gcagctccta aaagttcaga 1261 atgaagacgt tcagcgagct gtgtgtgggg ccttgagaaa cttagtattt gaagacaatg 1321 acaacaaatt ggaggtggct gaactaaatg gggtacctcg gctgctccag gtgctgaagc 1381 aaaccagaga cttggagact aaaaaacaaa taacaggttt gctgtggaat ttgtcatcta 1441 atgacaaact caagaatctc atgataacag aagcattgct tacgctgacg gagaatatca 1501 tcatcccctt ttctgggtgg cctgaaggag actacccaaa agcaaatggt ttgctcgatt 1561 ttgacatatt ctacaacgtc actggatgcc taagaaacat gagttctgct ggcgctgatg 1621 ggagaaaagc gatgagaaga tgtgacggac tcattgactc actggtccat tatgtcagag 1681 gaaccattgc agattaccag ccagatgaca aggccacgga gaattgtgtg tgcattcttc 1741 ataacctctc ctaccagctg gaggcagagc tcccagagaa atattcccag aatatctata 1801 ttcaaaaccg gaatatccag actgacaaca acaaaagtat tggatgtttt ggcagtcgaa 1861 gcaggaaagt aaaagagcaa taccaggacg tgccgatgcc ggaggaaaag agcaacccca 1921 agggcgtgga gtggctgtgg cattccattg ttataaggat gtatctgtcc ttgatcgcca 1981 aaagtgtccg caactacaca caagaagcat ccttaggagc tctgcagaac ctcacggccg 2041 gaagtggacc aatgccgaca tcagtggctc agacagttgt ccagaaggaa agtggcctgc 2101 agcacacccg aaagatgctg catgttggtg acccaagtgt gaaaaagaca gccatctcgc 2161 tgctgaggaa tctgtcccgg aatctttctc tgcagaatga aattgccaaa gaaactctcc 2221 ctgatttggt ttccatcatt cctgacacag tcccgagtac tgaccttctc attgaaacta 2281 cagcctctgc ctgttacaca ttgaacaaca taatccaaaa cagttaccag aatgcacgcg 2341 accttctaaa caccgggggc atccagaaaa ttatggccat tagtgcaggc gatgcctatg 2401 cctccaacaa agcaagtaaa gctgcttccg tccttctgta ttctctgtgg gcacacacgg 2461 aactgcatca tgcctacaag aaggctcagt ttaagaagac agattttgtc aacagccgga 2521 ctgccaaagc ctaccactcc cttaaagact gaggaaaatg acaaagtatt ctcggctgca 2581 aaaatcccca aaggaaaaca cctatttttc tactacccag cccaagaaac ctcaaaagca 2641 tgccttgttt ctatccttct ctatttccgt ggtcccctga atccagaaaa caaatagaac 2701 ataattttat gagtcttcca gaagaccttt gcaagtttgc caccagtaga taccggccac 2761 aggctcgaca aatagtggtc tttgttatta gggcttatgg tagatggctt cctggaatca 2821 aaatgtgaat tcatgtggaa gggacattaa tccaataaat aaggaaagaa gctgttgcat 2881 tactgggatt ttaaaagttt gatttacatt tatattcctt ttctggttcc catgttttgt 2941 cactcatgtg cacattgctt cgccattggg cctccagtgt attgttctgc agtgttgaaa 3001 cagaatggaa atgacaagaa atatctgcag ttatccagga gaaagtataa tggcaaaatt 3061 attggtttct ttctttactt tgtgcttgtt tttatcccct tgggttgttt ttctctgatt 3121 tttaaataaa cttaagaaat ttagattaca gagtatgcat gactgtaaga aaaagaaatt 3181 gagaggaagt gatcatagca aattaaagaa gtcttttcct cccagaactt aaagtaaaat 3241 aaaaaataaa taaataaata aaatcttttc cacagagaaa ggcaactgtg atgataaaat 3301 ttaacgttcc cccaaacact gagtcaatga gatttttctc aggagatact ttacctataa 3361 caatgccgtt aaatccaaat ctcttctaaa cgatggcatt ctatgtaatg cctttcctgg 3421 acttttttgg ccactgccct ggactagtga aagaatggac tctatcttta tctgcaagag 3481 gaactaaggc cttctatcag actgcctggc cagcctgggg cactgaaaat acggctcatg 3541 ttaatgagtt acattatcag ccagcccagc cttgcccacc atttaagaaa tatcacagag 3601 ccactagatc tcatatgatc ttcttcaagc cattatttta actcaagaaa actctagaga 3661 agaaaagtga agaagtcatg ttgaagaaga tgtaagaatg tgtcaagacc atccagaaat 3721 gatatgagaa atactgatat tttaaatagt gacatcatcc agcgaaatga atctacatta 3781 aatgttgttt taactgcgct atgattaaaa ccattcatat agagttagtc tttacaacta 3841 ctattctgtt attttttttt ttaatctgac aacatttgtc ctaagtaaga taagcaaaaa 3901 aattcttcaa ctccttttgg caagaaaact gtaacagaaa ataaattttg aatgtgtact 3961 taagtcttta ttatatttga aacaattttt tttcaatttt aaaagctgaa tgaagacaac 4021 ttaggttgct aacctagttc aaaatgaaat tatttagata ccaattttta aaatactgga 4081 gagaatttat atgtcttttt ccagagttct gatgataagc atttggagtg catttattcc 4141 tccagataat aaatgtgtgt tcagaacttt ttgtgttttt taaggcatta ataaagcctt 4201 cgataatatt aaatacaaaa aaaaaaaaaa a //