LOCUS BC094756 4896 bp mRNA linear HUM 28-JUL-2005
DEFINITION Homo sapiens myotubularin related protein 11, mRNA (cDNA clone
IMAGE:30349334), complete cds.
ACCESSION BC094756
VERSION BC094756.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4896)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4896)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-MAY-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Stefan Hansson
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 198 Row: l Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 5870890
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..4896
/db_xref="H-InvDB:HIT000335057"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:30349334"
/tissue_type="Placenta, pre-eclamptic"
/clone_lib="NIH_MGC_148"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..4896
/gene="MTMR11"
/gene_synonym="CRA"
/db_xref="GeneID:10903"
CDS 293..1039
/gene="MTMR11"
/gene_synonym="CRA"
/codon_start=1
/product="MTMR11 protein"
/protein_id="AAH94756.1"
/db_xref="GeneID:10903"
/translation="MGSVQENRMPEPRSRQPSSCLASRCLPGEQILAWAPGVRKGLEP
ELSGTLICTNFRVTFQPCGWQWNQDTPLNSEYDFALVNIGRLEAVSGLSRVQLLRPGS
LHKFIPEEILIHGRDFRLLRVGFEAGGLEPQAFQVTMAIVQARAQSNQAQQYSGITLS
KAGQGSGSRKPPIPLMETAEDWETERKKQAARGWRVSTVNERFDVATSLPRYFWVPNR
ILDSEVRRAFGHFHQGRGPVSVMVRVMAVD"
BASE COUNT 1082 a 1259 c 1222 g 1333 t
ORIGIN
1 agagtcgact gaagtttccg aggagacttc tcaggctggg ctggacacac ctctccaagg
61 acccccaaac tctgctccgt gcacgtcaaa tgctcctttc ccttgtgtcc aaccccctac
121 ccctctccct aacacccctc ttctcaacaa gactcagcct ctccccgagg tgggtgagca
181 tccttgaggt ttcccaccct taactgctgt gtccccggat ggagccagag aaatgtggtg
241 ggggggccgg ggccagagtt tcaacattgc cccccagaag gaggagccag agatggggtc
301 tgtccaggaa aacaggatgc cggagcccag gagtcgtcag cctagcagtt gcctggcctc
361 cagatgcctc ccaggggagc agatcctagc atgggcccca ggggtgagga agggcctgga
421 accagaattg tctggaaccc tgatctgtac caactttagg gtcaccttcc agccctgtgg
481 atggcagtgg aatcaggaca ctcccttgaa cagtgaatac gattttgccc tggtcaacat
541 tggacgatta gaggctgtga gcggcttgtc ccgagtccag ctcctccgtc cagggtccct
601 gcataaattt atccctgagg agattctgat tcatggccga gacttccggc tgctcagagt
661 tggttttgag gctggaggcc tagagcctca ggcttttcag gtgaccatgg ccattgtcca
721 agccagagct cagagcaatc aagcccaaca gtattcgggg ataaccctga gcaaggctgg
781 ccagggttct ggctccagaa aaccaccaat tcctctcatg gagacagcgg aagactggga
841 gactgagcgg aagaagcagg cagccagagg ctggagggtc agcacggtca acgagaggtt
901 cgacgtagcc accagcctcc cccgttactt ctgggtccct aaccgaattc tggacagtga
961 ggtcaggaga gcatttggcc actttcatca gggccgtgga ccggtcagtg tgatggttag
1021 ggtaatggct gtggattaga gggtcatgtg ggccagggac atcgtggagg gaggaacctc
1081 tgtgaggtca gtgtgggggc aagggtagcg tggagctagg catttctccc acaatgaccc
1141 tcttctgccc catgtgaagc gcttgtcctg gcatcaccct gggggcagtg atcttctccg
1201 ctgtggaggc ttctatacag ccagtgaccc taacaaggag gatatcaggt gagggaggct
1261 tgatgagaag aatcaagggt taggtgctca gggtagactc cttatttcct gactccctcc
1321 cctccagagc agtggagttg atgctccagg ctgggcattc agatgttgtc ctggtagaca
1381 ctatggatga gctgcccagc cttgcagatg tccaacttgc ccacctgagg ctgagggccc
1441 tctgcctgcc tgattcatct gtagctgagg ataaatggct ttcagccctg gaaggaacac
1501 gatggctgga ctatgtcagg gcttgtcttc gaaaggccag tgacatttca gtattagtga
1561 catccagggt tcgttctgta atacttcaag gtgagttcct tggttaagcc cattccattc
1621 cttgcctctt ttctttaccc acctgaccag attgcattca gggagggaga cccataaggc
1681 ttcttcctct cctgttcctg ggaactacct gcgagctcta ctctcatcct tcagtgctac
1741 ctctgcctcc ccatcacaac ttgtggtccc tgacactagg atggtcttag cccctttgtt
1801 cctttccttc catcagcgga tggagactgg ggttggggtg ggaagggcag tgtggaagct
1861 ggtttgagaa ttgtgattct gccccttaca tgtgaaactg ggtatttcta tccgggtgga
1921 gtccaggaag tgaatcattc aaggtctttg ttttctcttc acttctatgt gctttctcaa
1981 tcctcctacc ccaaaccttt cccctctgtg cctctcactt ctccttgccg tatttctctt
2041 ctcattctct tctgccctag tttcttggac ccctcttctt tgtcccttct tcctctttat
2101 cacccagagc gcggtgatcg tgatctcaat ggcctcctct cttcactcgt ccagctgctt
2161 tcagcccccg aagcccgaac actgtttggc ttccaatcac tagtacagcg agagtgggtg
2221 gcagctggac atcccttcct gactcggctt gggggaactg gggccagtga agaggtgaga
2281 atgattcggg atggcatcgg gggcatatta ctaaggaagt aagagaatga gaaattattt
2341 tgtataatcc attggaggtg aatccggtca gaagggcccc gaggttaggc tgggacgaag
2401 atcctgatga gtgaggcctt acaagcccct gctaccctca attcagattt tcattccctg
2461 acttccataa gttcccccta ttccctgtgt tccccattcc cttatcatct cgtcatcctc
2521 cctctttggg tcccaataat cccttccaac ctcttaattt cttttcaggc tccggtgttt
2581 ctcctcttcc ttgattgtgt ctggcagctc ctccagcagt ttccagctga ttttgaattc
2641 tctgagtttt tccttcttgc tcttcatgac agtgtcaggg ttcctgacac ccttaccttc
2701 ctgagaaata ccccctggga gcgcggaaag cagagcggac aggtcagtga cttctatttt
2761 tgactcgtgt ttttttttcc attgagatgt actctctgaa gtttggtctt gatttgtttt
2821 atgagaagtg aggtctgtga gtggggaggg ggagatttat tctcattttc aggacgagac
2881 ttttgcccta catctttcct agaataagag gtgagaatct catgatttgt ctctagatgt
2941 gggaggattg tgtgtaacca tcctttttct tgcttcctct gtccagttaa actcctatac
3001 acaagtctac accccaggat actcccagcc tccagctggg aactctttta acctgcagct
3061 gtctgtctgg gactgggatt tacgttatag caatgcacag atactacaat tccagaatcc
3121 tggctatgac ccagaacact gtccagattc ctggctccct agaccacagg tgaagtgtct
3181 aaacttccta aattcccttg acgttcccac aggctcatgc tactagacag tgagaagtga
3241 aagacaaaat gtcttgagtt ccttagggaa agctactcca ctactcttct gcagctgtca
3301 cttatagtcc ctgggtgtcc ctaggaagac agaagaccta gaatagcaca gagggcaccc
3361 tttttgtcct tcctcaagtc tgtttactca tcttcctgtc tcgtgcacac ataaggtgcc
3421 ctaaaatcaa ccttaatcag tcccgaggcc tagttgaagc ctaatgagga gggtagaaga
3481 gttctcatgg ggaggcttgt agttctagtc accagtgcag tgagtgggtg gcagcaggac
3541 accctgtcct gatccagatt ggggaaacta gggttatctg gtctctctgt tgccagttga
3601 ttttcttttc cttttagcca agcttcatgg ttcctggacc ccccagttct gtgtggctct
3661 tctctagagg agcattgacc cccctgaatc agctctgtcc ttggcgggac agtccttccc
3721 tgctggcagt ctcttctcgt tggctccctc gacctgctat ctcctctgaa agcctggctg
3781 accaggaatg gggtctcccc tcacattggg gagcttgccc tttacctcca gggctgctgc
3841 tgcctgggta tctgggaccc cagatcaggc tctggagacg ctgctacctg aggggaaggc
3901 ctgaggtcca ggtaagaagg gaaaatagac tgggagtggg acaagggact tgactctgct
3961 gaaccagatg aacaggagct ggaaaggcaa ggagctgaag cctctgggag tctgggaagt
4021 gaagttctac tcctcttggc atcaaacaag gtttgggagt gtaggaggtg cgggaaagtg
4081 cttgtggctt agattaagtg gaatttaggg catagctgaa aggggaaaca gaattaaaga
4141 caccagaagt agcagagaag cagggggcca gagctacaac agtattcttc tctgttcctc
4201 tttgcctcct ccccagatgg gcctctcagc tcccacaatc tctggcctcc aggatgagct
4261 atcccatctt caggagttat tacggaaatg gacaccaaga atatctcctg aggatcactc
4321 caagaaaaga gatccacata ccattctcaa tcccactgaa attgctggca ttctcaaagg
4381 cagggcagag ggggatctgg ggtagaggag ggttctgtct aatctttttt ttttttttgt
4441 atctgcactt gcagcctcag ctttcacact tcagccctta agttcactaa gaaggtctga
4501 gtttctgctg cagatagtgg tgttaactgc tccaactctt gtcttgctta gtttctacaa
4561 atatttttgc ttcttgtcat ttgaaggatt aagaaacaaa aacaatccag aaattgatcg
4621 gtttttttag gccaatccca tcccttctgg ataaccagat gttaaatcat gagatcagag
4681 atgctgttca tcagtcccaa caagatggcc tagaaatcgc attctcacct cgccttgctg
4741 ctgctttaat tccaagttct atttcttccc ttatagtttt ctatgggaat gaggcggata
4801 caggaaacac cctatctcct ctgtattttt gtagtggaat ttctatttaa ggggctcatt
4861 aaagcatagt atttatacac aaaaaaaaaa aaaaaa
//