LOCUS BC094747 4747 bp mRNA linear HTC 27-OCT-2008
DEFINITION Homo sapiens SET and MYND domain containing 2, mRNA (cDNA clone
IMAGE:30331437), with apparent retained intron.
ACCESSION BC094747
VERSION BC094747.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4747)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4747)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-MAY-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Stefan Hansson
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 198 Row: f Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 9910273
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..4747
/db_xref="H-InvDB:HIT000335048"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:30331437"
/tissue_type="Placenta, pre-eclamptic"
/clone_lib="NIH_MGC_148"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
BASE COUNT 1223 a 1095 c 1191 g 1238 t
ORIGIN
1 ggggagccgc cgccgcgtcc gccgggcggc tcccaccccg ccccccgcag ctctaggtga
61 cgcgtctcca ataacagctc gccgggagcc gcagctcggg cacagccggc ggccgcgccc
121 cgccgccacc atgagggccg agggcctcgg cggcctggag cgcttctgca gcccgggcaa
181 aggccggggg ctgcgggctc tgcagccctt ccaggtgggg gacttgctgt tctcctgccc
241 ggcctatgcc tacgtgctca cggtcaacga gcggggcaac cactgcgagt actgcttcac
301 caggaaagaa ggattgtcca aatgtggaag atgcaagcag gcattttact gcaatgtgga
361 gtgtcagaaa gaagattggc ccatgcacaa gctggaatgt tctcccatgg ttgtttttgg
421 ggaaaactgg aatccctcgg agactgtaag actaacagca aggattctgg ccaaacagaa
481 aatccaccca gagagaacac cttcggaaaa attgttagct gtgaaggagt ttgaatcaca
541 tctggataag ttagacaatg agaagaagga tttgattcag agtgacatag ctgctctcca
601 tcacttttac tccaagcatc tcggattccc tgacaatgat agcctcgtag tactctttgc
661 acaggttaac tgtaatggct tcacaattga agatgaagaa ctttctcatt tgggatcagc
721 gatatttcct gatgttgcat tgatgaatca tagctgttgc cccaatgtca ttgtgaccta
781 caaagggacc ctggcagaag tcagagctgt acaggaaatc aagccgggag aggaggtttt
841 taccagctat attgatctcc tgtacccaac ggaagataga aatgaccggt taagagattc
901 ttatttcttt acctgtgagt gccaggagtg taccaccaag gacaaggata aggccaaggt
961 ggaaatccgg aagctcagcg atcccccaaa ggcagaagcc atccgagaca tggtcagata
1021 tgcacgcaac gtcattgaag agttccggag ggccaagcac tataaatata tcctttacaa
1081 ctgccctgat agcttattat ccctcgccaa caaggcaagg tgggaagttg gaaagaggga
1141 gcaggagaag gatggattta agattctgaa aaccaaagga ggaatgtctc ctagtaaatg
1201 tgtaaaggcg tactgaccac ccacaatgtg gtgtccatcc tgttggagtt gtatgatttt
1261 atttcccctt attttggcta gtttggctgg gagccccatg tggtggagga ccatgaagga
1321 cagagccttg atggccttgt gctttgggta ttttactttg ggcagggcac agtgccaagg
1381 gccttgctta tttcagctct cctcactggc acactctgag cagggactct gctcattccc
1441 atgcagcaga tgaggaaaca gcctgataga tattaagtaa tttgcccaaa ggacacagct
1501 gatggtgata ggatctagga ttttgtccca gctctatcag aatccatatt cttaaccatt
1561 gtattgtagc attttcttgg gagttgaaaa gggattcgat ttgtactcta aagggtagaa
1621 tttaaaacca gtgagaggaa atgagagaaa ggcacattgt ttctcagcat aagaaagaac
1681 tttgccacag tgggagtcgt gctcagggtt ccaacttggg tgaggatttg aatttgatta
1741 gaatcgtgat tttaatcaac attgtttaca tcagaactag gggtctggac cctgcggcta
1801 aaattcttga gttgagcggt tccgaccttc aggttttctt catttgtttt ttctggagaa
1861 atgtaattcc tttcactttt gcttggcttt ctgtaagtta ctttttcatg gggtaagggt
1921 gagagtggag tggacgaaat aactccttga acccagcctg gggaagcctc caggcagctt
1981 gggcccggtg gccctttcct tgactccaca gcacccccta gtgagctgct ggagatctgc
2041 gagctcagcc aggagaagat gagctctgtg tttgaggaca gtaacgtgta catgttgcac
2101 atgatgtacc aggccatggg tgtctgcttg tacatgcagg actgggaagg agccctgcaa
2161 tatggacaga aaatcattaa gccctacagg tgattgcaga ggctgttcta atcatccacg
2221 gagtggaatt tggttgttta gaatgtatac gatagtgtca tcttcctgcc cattgctgag
2281 acttgcctag cgcagctgcc tcttctctgc acccacatct ggaggtgctg gtgcagggca
2341 ctgctcccga gtcaggcctg ttctcaccat catcccaagg agacaggttg aggttatgca
2401 gcggatactg gggcaagatc cctcccaggt ccatccaggg ccatatccat agtagttaac
2461 tcaggctagt tttgagaagc cactagtttg cttcttttcc cacccactgc ttccaagttt
2521 aattactaag tggtggtctc agaaaccctg gttttcatca ttactcacac catccccttc
2581 ttttgctttt tcaaattaca gccccagttt gcaaatgggg aagctctggg accagtgggt
2641 tgaccgtggt tatctaatct ccccacccca ggtttggaaa aaagaaacaa aaattgcttt
2701 ttaatttgta gtaataatga atattagccc tggagagatt tcctgcctga gagggttact
2761 aaacctaaaa gtgggtgaca gacggaagtt gtggctttgt cctctgactc ggactaggca
2821 cttcagggct gaggtggcct agatgggatc actggagctc tttttaaagg cactgatatt
2881 atgcatttac agggtacgtc caacaccaag tgggccaagt gaatcagggt cgctgggcat
2941 tagacccaga aatctgtgtt ctggaagcat cccaggtgtt tctcaggagt ttgagaagcc
3001 ctcagtctcc ttccacttcc gagattaggg tctgtgaagg ttgtgtctgg tctgaatgtc
3061 cactgcccac tccaccctct acttacccca ctgtgccctg attagccagc agggggagcc
3121 caaaggaagc cagctcttaa aatctgctct tggaaacaga atttgttaaa ttggggataa
3181 actcaaacct tccttttctc ctagagtgtg tgaggaagtg cactggcctc atgcgcagtt
3241 ctctgtgtga gatctgtagg gagagaggag cagacagaca gcatcccagc cctgtggttc
3301 tcccagcagg gccttgctct gctagaccca tctttatctg cgtgagcccc tcccggaagc
3361 ccagctctgg tcttctgtgg ggccgtgggt cccagggctg cctcctaccc aggaatacag
3421 ctagaacatg tctttttgga ctgactttca ggagacacag ggtggaacag cctagccttt
3481 aaataaacac ctcttacaca catgtaaaca cacacactgg ctcacccacc agctgcctct
3541 gggccctgtt cttagggaaa tggctgtttc ccaggcagac cccatcagtc agtcttcagg
3601 tacagccgga gagaacactt gctgtatcta aagcccctgc tggacaatgg ggaaagaaca
3661 tccagaagac acaggaagtg ttctgacttc agagcactta actgttttgc taaaccaacc
3721 catatcatag tgtgacagaa agctggggtc ttaagacaca ttggggtggg tgggggttgg
3781 gtgggtggct gtatgtctga gtacctaagg tgataggcct aattgctgcc ttcataaatg
3841 ggacatttac ttcacaagct gttttcccag ggtcttcctc tgggtatgtc tgaaaaataa
3901 aaatctggac tgggattgaa gattgtgttt acaaatgctt ttgaatagga tttctcctgc
3961 agttgttacg tagcttttca gaaacacaca aactacaaat aatgaacaac atctgcaatg
4021 attcggcagg gtggcagcat ccacgctctc cacccaaacc ctggtgggat ttggagaggc
4081 cgctggtggg cagaggttgg ccctaagcat ggcagcctcc ggcttactgc acccagcctg
4141 tggggcggct cagtagccgc tgacatggtg gcctgttgtc tcttctcttg ttctagtaag
4201 cactatcctt tgtactccct caacgtggcc tccatgtggt tgaagctagg gagactctac
4261 atgggcctgg aacacaaagc cgcaggggag aaagccctga agaaggccat tgcaatcatg
4321 gaagtagctc acggcaaaga tcatccatat atttctgaga tcaaacagga aattgaaagc
4381 cactgaaact atgcagcatt tcagttttca tttaaacact tagttcagaa accttaaagg
4441 atttgaatat ttcaaattgc acacgtcact ccagcatctc tgtaaaataa ttggaatgaa
4501 aatacttctt gcacttaaac actgcacatg ccgtactttg aggttagtct gaatcttgaa
4561 ctttaatacc aaattaattt tgaatgcttt tgtttcctaa gagataatgg catggtttca
4621 tatgttatac tttggacaga cagagtttta aaaatggaat tattttttct ttcatgcctc
4681 ttgtaatgtt ctgaacaaac ttgaatgatg aaagtattaa agagatatca gaaaaaaaaa
4741 aaaaaaa
//