LOCUS BC094745 3768 bp mRNA linear HTC 13-APR-2006
DEFINITION Homo sapiens integrator complex subunit 6, mRNA (cDNA clone
IMAGE:5272649), with apparent retained intron.
ACCESSION BC094745
VERSION BC094745.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3768)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3768)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-MAY-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 198 Row: d Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 11024693
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..3768
/db_xref="H-InvDB:HIT000335046"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5272649"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
BASE COUNT 1185 a 798 c 793 g 992 t
ORIGIN
1 agatggctgg gcgcccgccc cagcgggcag gcaggcagga ggaggcggag gcgggggtac
61 gacggggagc actgggtctg gggagtttcc tctcaactat cgggggagaa actccccgca
121 gccggaggaa agacccagac agtgttttcc tcccgggggc cgtgctcccc cgccccgcgt
181 agcggcggtc gccgccaccg gcgcctccac ctctaccatc tcctctttct ccaccacctc
241 gggccccggt gtccccggcc agcactatgc ccatcttact gttcctgata gacacgtctg
301 cctctatgaa ccagcgcagc catctgggca ccacctacct ggacacggcc aaaggcgcgg
361 tagagacctt catgaagctc cgtgcccggg accctgccag cagaggagac aggtatatgc
421 tggtcacttt cgaagagccg ccctatgcta tcaaggctgg atggaaagaa aaccatgcaa
481 cgtttatgaa tgaattgaaa aaccttcagg ctgaaggact tacgactctt ggccaatccc
541 taaggacagc ttttgattta ttaaatttaa atagattagt aactggcata gacaactatg
601 ggcagggaag aaaccctttt ttcttggagc cagcaataat tatcacaatt actgatggga
661 gcaagttgac taccaccagt ggagtccagg atgaggtact ggggacacac agatggaatt
721 aagcaaggct agaaaacgta ttatctttga agacagctaa aggagcagcc cagtggtttt
781 caagaagtgc taaagtgcac tgactgtctc atgatgactg gtgcctcagg gagggtcatg
841 attcctggat acaggatcga cctgatcctg gatgtcactt caagcagtca gatcgtgggg
901 aaaagccttg tctaatggct agccttcctc aaaagtctga tgctagtcat ctcggaaggc
961 ctcagaaaaa gccttaaagc ttcatttacc tcttaattct cctttgcctg gaagtgaatt
1021 gaccaaggaa ccttttcgtt gggatcagag actctttgca ttagtgttgc ggttgcctgg
1081 caccatgtca gtagaatcag aacagttgac aggtgtgcct ttagatgact ctgcaatcac
1141 accaatgtgt gaagtgacag gcggccgttc atattctgtg tgttctccaa gaatgcttaa
1201 tcagtgtctg gagtccttgg tgcagaaagt acaaagtggg gtggtaataa actttgaaaa
1261 agcaggacca gatccttccc ctgtagaaga tgggcagcca gatatatcaa ggccttttgg
1321 atctcagcct tggcatagct gtcacaaact catatatgtc agaccaaatc ctaaaactgg
1381 ggttcctata ggtcattggc ctgttccaga gtctttttgg ccagatcaaa attcgccaac
1441 actaccacct cgtacatctc atcctgtagt gaagttttcc tgtacagact gtgaaccaat
1501 ggttattgat aaacttcctt ttgacaaata tgagttggaa ccttcaccac tgactcaatt
1561 tatcctggaa aggaaatctc ctcaaacatg ttggcaggtg tacgtgagca atagtgcaaa
1621 atacagtgaa cttggtcatc cttttggtta cttgaaagcc agtacagcac tgaactgtgt
1681 caacttattt gtgatgcctt acaattatcc agtccttctt cccctcttag atgacttgtt
1741 taaagtgcat aaagcaaaac caacattgaa gtggagacag tcatttgaaa gttatttgaa
1801 gacaatgcct ccctactatc ttgggccctt gaagaaagct gttaggatga tgggagcacc
1861 taacctaata gcagacagta tggaatatgg acttagttac agtgtcattt catacctcaa
1921 aaaactgagt caacaggcca aaatagaatc tgatcgagtc attggatctg taggcaaaaa
1981 agtagtacag gagactggaa taaaagtccg gagccgatca catggtttat caatggcata
2041 taggaaagat tttcaacaac tcctccaggg aatttcagag gatgtccctc acagactgct
2101 agaccttaat atgaaggaat acactgggtt ccaagttgct ttgctgaata aggatttgaa
2161 gccacagata tttagaaatg cttatgacat accaagacga aatcttttgg atcacttaac
2221 aagaatgaga tctaatcttt tgaagagcac tcgcagattt ctgaaaggac aggacgaaga
2281 tcaagtgcac agtgttccta tagcacaaat ggggaactac caggaatacc tcaagcaagt
2341 accttctcca ctaagagaac ttgatcctga tcagccacga aggttgcata catttggcaa
2401 cccctttaag ctggataaga agggtatgat gatagatgaa gcagatgaat ttgtggctgg
2461 acctcaaaat aaacataaac gacccggaga accaaatatg caagggatcc ctaaaagacg
2521 tcggtgtatg tctccactac taagaggcag acagcagaat cctgttgtaa acaatcatat
2581 tgggggaaaa ggaccacctg cacctacaac tcaagcacag ccagatctta ttaaacctct
2641 tcctcttcat aaaatttcag aaaccactaa tgattcgata atacatgatg tggttgaaaa
2701 tcatgttgca gaccaacttt catcagacat tacaccaaat gctatggata cggaattttc
2761 agcatcttct ccagccagtt tactggaacg gccaaccaat catatggagg ctcttggtca
2821 tgaccattta ggaaccaatg acctcactgt tggtggattt ttagaaaatc atgaggagcc
2881 aagagataaa gaacaatgtg ctgaagagaa cataccagca tcttcactca acaaaggaaa
2941 gaaattgatg cattgcagaa gccatgaaga ggtcaatact gaactaaaag cacaaataat
3001 gaaagagatc cgaaagccag gaagaaaata tgaaagaatc ttcactttac tggagcatgt
3061 gcaaggcagt ttacaaacaa gactaatatt tttacaaaat gtcattaaag aagcatcaag
3121 gtttaaaaaa cgaatgctaa tagaacaact ggagaacttc ttggatgaaa ttcatcgaag
3181 agccaatcag atcaaccata ttaatagcaa ttaaaagaaa atagaatgtg gccacttatt
3241 tcactatctt cttcaaatac aaagtaaata caagactgtt gtgatcttgc attcattttc
3301 tgacatgcat tgttggctat ttgaaatact aaaagcaaat ctacagatcc tttttccatc
3361 attttacagt gaccttttct tcattttggt ttatttttgt aatgtgaaaa gtatcactct
3421 aaaaaacatt tttaatttaa caaactaaaa atattcctcc aaatctcttg cttgtcattg
3481 actcttgcgt gtcaatttcc ctcaggttct attttcttaa accaaccttt aaaattgtca
3541 cctctgttaa ggttgaactt tgccaaaaaa aaaaagaagt tactttgtaa tttttgggga
3601 aaaaagcaca tacattaaaa ctaggtaatg ttttgtatat acagttattt tggatatatt
3661 attgtaagtt gtacaaatgt attttgaaga atatttaaga aaagcacttt tgttattcca
3721 tcaataaatg ctctatttta ctcttgaaaa aaagaaaaaa aaaaaaaa
//