LOCUS BC094732 2214 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens A kinase (PRKA) anchor protein 7, mRNA (cDNA clone
IMAGE:5275622), complete cds.
ACCESSION BC094732
VERSION BC094732.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2214)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2214)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-MAY-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 198 Row: d Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 20336197
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..2214
/db_xref="H-InvDB:HIT000335033"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5275622"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2214
/gene="AKAP7"
/gene_synonym="AKAP18"
/db_xref="GeneID:9465"
/db_xref="HGNC:HGNC:377"
/db_xref="MIM:604693"
CDS 148..393
/gene="AKAP7"
/gene_synonym="AKAP18"
/codon_start=1
/product="A kinase (PRKA) anchor protein 7"
/protein_id="AAH94732.1"
/db_xref="GeneID:9465"
/db_xref="HGNC:HGNC:377"
/db_xref="MIM:604693"
/translation="MGQLCCFPFSRDEGKISEKNGGEPDDAELVRLSKRLVENAVLKA
VQQYLEETQNKNKPGEGSSVKTEAADQNGNDNENNRK"
BASE COUNT 686 a 378 c 462 g 688 t
ORIGIN
1 ggcttgtgca ttggctcttc aagctgcctg tgctgctcag tggagtgaaa aaggcagggt
61 gtgctcgcag actgtgctat aaactgcaat ttctatttgg ggtcctcacg gagaagaaca
121 ccaggaaaga cagacaggac cagtgccatg ggccagcttt gctgctttcc tttctcaaga
181 gatgaaggaa aaatcagtga aaagaacgga ggggagcccg atgacgctga actagtaagg
241 ctcagtaaga ggctggtgga gaacgcggtg ctcaaggctg tccagcagta tctggaggaa
301 acacagaata aaaacaagcc gggggagggg agctctgtga aaaccgaagc agctgatcag
361 aatggcaatg acaatgagaa caacaggaaa tgagcccgga acgcaggccc ccatgtctct
421 gtgcaaagcc tccctgcttc cctctgctga gtctagggac tgacttgcag cgtgctgttt
481 aagttaagtt tctctggtgc aatctgtgaa gattgcctaa tacttttcat gatcgatgtg
541 ttcgcattgc tgaaacacaa cataagaaaa atggagtgct gggactggca gaggaaatta
601 attgatgaaa gaagaatggc ccaagtttca ttcgccctca gccacgcaca agggaaaggg
661 aactttgggt tatgcctcct ggacgcaaat taaaggccgg gaaagaggcc ttgccatcaa
721 tggaatactg ccatttatat tgcttagcag ggcatttgac tactttatct gaggccagaa
781 ctctcacaca cagctatcag gtgctaagtt taaaataatc actgttggaa ttgtcatctg
841 tacaattagt ccataatgtt tcatgtttgt cctaagtgtg ctgttgctat gcagtgtgat
901 ctttatttat agtaaattat gtttcatgta aatgatatat ttttggtgaa atgcaacctt
961 ttctataaaa tgtgggcaac attttaaagt ttttttaaaa tcctattttg ataagtcagt
1021 atgccatatt taatgaaatg ttattatata attttttttt cttaggcaag aaacctattg
1081 gaattcgaga cttaattaat gaagctttgc atcgagaaac gatgggtctg aagtccaaag
1141 tgaaacagat aaaggaactt ttattaaagc ctgagactca ggccagaatt aggagggagc
1201 tttttgaagg aagacttatt aacaacagta attcagcaaa tgacgttgat ttcagcacaa
1261 ctttgacata agctctacat tgcgattgtg acaacatagc ttatgaaatc ttttcagctt
1321 attaagtagc tctttggtaa acaccaaaga agtttctgat agtgtctgca caacagcaaa
1381 ccaacatttg gtgaggaatt agcaatttct tgccaaagaa aattgattct gcccaattat
1441 tttttgagct acacttgtgt tttagaatat ctgtttctgt aatattgaga gttattttat
1501 agaaatgatt tcttaattag ctgttgtgag atatttctcg ggtccttgca gaaaaaaaca
1561 tacagactgt gaacaaatca ttcacaaaca gaataaaaca gagccaacaa cagtatttta
1621 agggtcactt gcctcctgtt gacacaattg ttgctaaatc aaaagaagcg ttgtccaggt
1681 gtgtctacat ctagtgttac ttttaatgag aatttgaatg tttattgaac aatagtactt
1741 gaatgaacat ttataaatgt aattattgcg atcactggtt aagaatgttt tatatatcct
1801 tataatattt ttcactgatc aaaatgttgt tctgcttttt catttcttaa ggaatacatg
1861 tttgggattt ttatttttta cgtgtccgaa gataagctcc aggtcttatc gtatcccttg
1921 ccatctgaac ttgtttgcac tgcttctgtt tgaaagagca tcttgaaaaa cttccccggt
1981 atgatgattg ttggtaacaa ctttttctat agtcattgat ggagtagatc atgatggagg
2041 ggaaatcact ggagatcaaa tatgtaaaat catttcaaat ataaaatcca gtttactcat
2101 ggattttagc tattttttca ctgggtaaat tatactacat ttatttacaa atgagtttat
2161 gcattttcat ggctcttaat aaacatattg ttttccccaa aaaaaaaaaa aaaa
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