LOCUS BC094700 2709 bp mRNA linear HUM 01-JUN-2005
DEFINITION Homo sapiens solute carrier family 39 (zinc transporter), member
12, mRNA (cDNA clone MGC:104205 IMAGE:30407123), complete cds.
ACCESSION BC094700
VERSION BC094700.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2709)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2709)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-MAY-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Michael Brownstein and Dr. Miklos Palkovits
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 68 Row: c Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22749432.
FEATURES Location/Qualifiers
source 1..2709
/db_xref="H-InvDB:HIT000335001"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:104205 IMAGE:30407123"
/tissue_type="Skin and meninges pool- skin, dura matter,
pia matter, choroid plexus."
/clone_lib="NIH_MGC_186"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..2709
/gene="SLC39A12"
/gene_synonym="bA570F3.1"
/gene_synonym="FLJ30499"
/db_xref="GeneID:221074"
CDS 150..2225
/gene="SLC39A12"
/gene_synonym="bA570F3.1"
/gene_synonym="FLJ30499"
/codon_start=1
/product="SLC39A12 protein"
/protein_id="AAH94700.1"
/db_xref="GeneID:221074"
/translation="MCFRTKLSVSWVPLFLLLSRVFSTETDKPSAQDSRSRGSSGQPA
DLLQVLSAGDHPPHNHSRSLIKTLLEKTGCPRRRNGMQGDCNLCFEPDALLLIAGGNF
EDQLREEVVQRVSLLLLYYIIHQEEICSSKLNMSNKEYKFYLHSLLSLRQDEDSSFLS
QNETEDILAFTRQYFDTSQSQCMETKTLQKKSGIVSSEGANESTLPQLAAMIITLSLQ
GVCLGQGNLPSPDYFTEYIFSSLNRTNTLRLSELDQLLNTLWTRSTCIKNEKIHQFQR
KQNNIITHDQDYSNFSSSMEKESEDGPVSWDQTCFSARQLVEIFLQKGLSLISKEDFK
QMSPGIIQQLLSCSCHLPKDQQAKLPPTTLEKYGYSTVAVTLLTLGSMLGTALVLFHS
CEENYRLILQLFVGLAVGTLSGDALLHLIPQVLGLHKQEAPEFGHFHESKGHIWKLMG
LIGGIHGFFLIEKCFILLVSPNDKQGLSLVNGHVGHSHHLALNSELSDQAGRGKSAST
IQLKSPEDSQAAEMPIGSMTASNRKCKAISLLAIMILVGDSLHNFADGLAIGAAFSSS
SESGVTTTIAILCHEIPHEMGDFAVLLSSGLSMKTAILMNFISSLTAFMGLYIGLSVS
ADPCVQDWIFTVTAGMFLYLSLVEMLPEMTHVQTQRPWMMFLLQNFGLILGWLSLLLL
AIYEQNIKI"
BASE COUNT 800 a 590 c 537 g 782 t
ORIGIN
1 actctccagg atttaaaagg ctgtggagct ccagataaag aatcgtttat ctttcttctg
61 aagaaattcc tttggttaca agtttacccc ataaacggca acacactcac ctccatccaa
121 gacagactca aggtggagga agcgtggaaa tgtgcttccg gacaaagctc tcagtatcct
181 gggtgccatt gtttcttcta ctcagccgtg ttttttctac tgagacagac aaaccctcag
241 cccaggatag cagaagccgt gggagttcag gccaaccggc agacctgcta caggttctct
301 ctgctggtga ccacccaccc cacaaccact caagaagcct catcaaaaca ttgttggaga
361 aaactgggtg cccacggagg agaaacggaa tgcaaggaga ttgcaatctg tgctttgaac
421 cagatgcact attactaata gctggaggaa attttgaaga tcagcttaga gaagaagtgg
481 tccagagagt ttctcttctc cttctctatt acattattca tcaggaagag atctgttctt
541 caaagctcaa catgagtaat aaagagtata aattttacct acacagccta ctgagcctca
601 ggcaggatga agattcctct ttcctttcac agaatgagac agaagatatc ttggctttca
661 ccaggcagta ctttgacact tctcaaagcc agtgtatgga aaccaaaacg ctgcagaaaa
721 aatctggaat agtgagcagt gaaggtgcta atgaaagtac gcttcctcag ttggcagcca
781 tgatcattac tttgtccctc cagggtgttt gtctgggaca aggaaacttg ccttccccag
841 actactttac agaatatatt ttcagttcct tgaatcgtac gaataccctc cgcctatcag
901 aactagacca actcctcaac actctctgga ccagaagtac ttgtatcaaa aatgagaaaa
961 tccatcaatt tcaaaggaaa caaaacaaca taataaccca tgatcaggac tattctaatt
1021 tctcttcatc catggaaaaa gagtctgagg atggtccagt ttcctgggat cagacctgct
1081 tctctgctag gcagctggtg gagatatttc tacagaaggg cctctcactc atttctaagg
1141 aggactttaa gcaaatgagt ccagggatca tccagcagct cctcagctgc tcctgccact
1201 tacccaagga ccaacaagca aagctgccac ctaccactct ggagaaatac ggctacagca
1261 cggtggctgt cacccttctc acactgggct ccatgctggg gacagcgctg gtccttttcc
1321 atagctgtga ggagaactac aggcttatct tacagctgtt tgtgggcttg gccgtcggga
1381 cactgtctgg ggacgctctg ctccacctta tccctcaggt tcttggttta cataagcagg
1441 aagccccaga atttgggcat ttccatgaaa gcaaaggtca tatttggaaa ctgatgggat
1501 taattggagg catccatgga tttttcttga tagaaaaatg ttttattctt cttgtatcac
1561 caaatgacaa gcagggcctg tcattggtta atgggcacgt gggtcattcc caccatcttg
1621 cactcaactc tgaattaagt gaccaggcag gcagaggcaa atctgcttca actatccagt
1681 tgaaaagccc agaagattca caggcagctg aaatgcctat aggcagtatg acagcctcca
1741 acagaaaatg taaagccatt agcttgttag caatcatgat tctggttggg gacagcctgc
1801 ataattttgc agatggccta gccataggag cagccttctc atcatcatcc gagtcaggag
1861 tgaccactac gattgctatc ttgtgtcatg aaatcccaca tgaaatggga gactttgccg
1921 tgctcttaag ctctggactt tctatgaaga ctgccatcct gatgaatttt ataagctccc
1981 taactgcctt catgggatta tacattggcc tttccgtgtc agctgatcca tgtgttcaag
2041 actggatctt cacagtcact gctgggatgt tcttatattt atccttggtt gaaatgcttc
2101 ctgaaatgac tcatgttcaa acacaacgac cctggatgat gtttctcctg caaaactttg
2161 gattgatcct aggttggctt tctctcctgc tcttggctat atatgagcaa aatattaaaa
2221 tataagtgag gatcttcaac atctttcaaa aatgcattta tatagtctta ctttgtttct
2281 ttcattgcac tctataatga tttttaaatt aagaattttt tatcttaggc aaagtgtgtc
2341 tctttcaatt cattaactta ttaattttat aatgcagttt tatttttgga aacatataaa
2401 tatcagactg tccttaattg aaattttgcc tttggtttcc aacaccatga tgaagctctt
2461 gctttttaaa aagtagttag taaattctgc atgaatttta gtaaacttta aaaaatagat
2521 tttttcccta agaaagaatg tttgtagaat ttaaagtgga cagatgcctg ttggggtaaa
2581 atcaactgca actttttgat gttaattttt ttccctgtgc aattataaac tataagcaag
2641 ttaagtgaca agcaaatgta ataaagacta gttttaatac aaaaaaaaaa aaaaaaaaaa
2701 aaaaaaaaa
//