LOCUS BC094699 2102 bp mRNA linear HUM 01-JUN-2005
DEFINITION Homo sapiens transient receptor potential cation channel, subfamily
M, member 3, mRNA (cDNA clone IMAGE:30716887), complete cds.
ACCESSION BC094699
VERSION BC094699.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2102)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2102)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-MAY-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Professor Miklos Palkovits
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 68 Row: d Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 45935356
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..2102
/db_xref="H-InvDB:HIT000335000"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:30716887"
/tissue_type="Spinal cord"
/clone_lib="NIH_MGC_227"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..2102
/gene="TRPM3"
/gene_synonym="LTRPC3"
/gene_synonym="MLSN2"
/db_xref="GeneID:80036"
/db_xref="MIM:608961"
CDS 350..1321
/gene="TRPM3"
/gene_synonym="LTRPC3"
/gene_synonym="MLSN2"
/codon_start=1
/product="TRPM3 protein"
/protein_id="AAH94699.1"
/db_xref="GeneID:80036"
/db_xref="MIM:608961"
/translation="MYVRVSFDTKPDLLLHLMTKEWQLELPKLLISVHGGLQNFELQP
KLKQVFGKGLIKAAMTTGAWIFTGGVNTGVIRHVGDALKDHASKSRGKICTIGIAPWG
IVENQEDLIGRDVVRPYQTMSNPMSKLTVLNSMHSHFILADNGTTGKYGAEVKLRRQL
EKHISLQKINTRIGQGVPVVALIVEGGPNVISIVLEYLRDTPPVPVVVCDGSGRASDI
LAFGHKYSEEGGLINESLRDQLLVTIQKTFTYTRTQAQHLFIILMECMKKKELVGNSA
WVASCLHIFSHFLESHNIFSNHATFSLSGRAYSSPQAPLAPVASSPK"
BASE COUNT 627 a 477 c 469 g 529 t
ORIGIN
1 agcaaaatga aagcaacagg agctgctccg gggactgctt ttgccagtac ccagaatcag
61 tgctcaggct cagaaatcct ggatagaaag agcattttat aaaagagaat gtgtccacat
121 catacccagc accaaagacc cccataggtg ttgctgtggg cgtctgatag gccagcatgt
181 tggcctcacc cccagtatct ccgtgcttca gaatgagaaa aatgaaagtc gcctctcccg
241 aaatgacatc cagtctgaaa agtggtccat cagcaaacac actcaactca gccctacgga
301 tgcttttggg accattgagt tccaaggagg tggccattcc aacaaagcca tgtatgtgcg
361 agtatctttt gatacaaaac ctgatctcct cttacacctg atgaccaagg aatggcagtt
421 ggagcttccc aagcttctca tctctgtcca tgggggcctg cagaactttg aactccagcc
481 aaaactcaag caagtctttg ggaaagggct catcaaagca gcaatgacaa ctggagcgtg
541 gatattcact ggaggggtta acacaggtgt tattcgtcat gttggcgatg ccttgaagga
601 tcatgcctct aagtctcgag gaaagatatg caccataggt attgccccct ggggaattgt
661 ggaaaaccag gaggacctca ttggaagaga tgttgtccgg ccataccaga ccatgtccaa
721 tcccatgagc aagctcactg ttctcaacag catgcattcc cacttcattc tggctgacaa
781 cgggaccact ggaaaatatg gagcagaggt gaaacttcga agacaactgg aaaagcatat
841 ttcactccag aagataaaca caagaatcgg tcaaggtgtt cctgtggtgg cactcatagt
901 ggaaggagga cccaatgtga tctcgattgt tttggagtac cttcgagaca cccctcccgt
961 gccagtggtt gtctgtgatg ggagtggacg ggcatcggac atcctggcct ttgggcataa
1021 atactcagaa gaaggcggac tgataaatga atctttgagg gaccagctgt tggtgactat
1081 acagaagact ttcacataca ctcgaaccca agctcagcat ctgttcatca tcctcatgga
1141 gtgcatgaag aagaaggaat tggtaggtaa ttccgcatgg gtggccagct gtctccacat
1201 tttcagtcat tttcttgaat cacacaacat tttctcaaat catgcaacat tctctctttc
1261 tggccgagct tacagctctc ctcaggctcc attggctcca gtagcttcct ctcctaagta
1321 actaagacac tgcttttact gccttcgagt taataaggtg tgtgcagcag agttttagca
1381 tcatttcctt ttggagctca tccaaacgct ctgactgcct caacaaaatg agttgaagtg
1441 ataaaattgg tcccctcctg gagaacgctt cagcttgatc ttcttaggtt tcggatttca
1501 ttttgcttgg aagtcatgaa ccactgaggt gctttctgtc aaatagcttt aatgacaaag
1561 ggtccaggct gttacactaa tctgtacagg tagaaaacgg agaaacataa gaaatcctgg
1621 aggaatctaa aatcagagca aaatgtgttt ctaaaatcag agcaaaatgt cttacaaatg
1681 tggtatgatc agagaccctg ctagggtgaa caaaatcatg tgattttgtt ctctgcttac
1741 tcaaacattt aacaagaact tgctatctgc caagcaggga gcaagatctt tatgcatata
1801 aactcatatg acctttgcaa ctgtcctgat gagagaggta caattattac cctcatctta
1861 cagatgagga aacccggctc atttgattag taaatgagga gctaagactc aaaaccagtg
1921 atgtttaacc tctgtatgga gtatttttat tcagaaagtg tctcactgaa gccaatgcag
1981 tggatcaccc actctgggta gatgccccca ggcttcagcc agagagacta ttctcaaagg
2041 tcagttaaac ccaactgctg agagagatag caaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2101 aa
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