LOCUS BC094542 4932 bp mRNA linear ROD 17-JUL-2006
DEFINITION Mus musculus F-box protein 28, mRNA (cDNA clone MGC:106621
IMAGE:6408744), complete cds.
ACCESSION BC094542
VERSION BC094542.1
KEYWORDS MGC.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 4932)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4932)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-MAY-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Jim Lin, University of Iowa
cDNA Library Preparation: M. Bento Soares, University of Iowa
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 205 Row: d Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 28201988.
FEATURES Location/Qualifiers
source 1..4932
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6"
/db_xref="taxon:10090"
/clone="MGC:106621 IMAGE:6408744"
/tissue_type="Brain, enriched mouse brain 12.5dp"
/clone_lib="NIH_BMAP_FO0"
/lab_host="DH10B"
/note="Vector: pYX-ASC"
gene 1..4932
/gene="Fbxo28"
/gene_synonym="Fbx28"
/gene_synonym="mKIAA0483"
/db_xref="GeneID:67948"
/db_xref="MGI:MGI:1261890"
CDS 18..1124
/gene="Fbxo28"
/gene_synonym="Fbx28"
/gene_synonym="mKIAA0483"
/codon_start=1
/product="F-box protein 28"
/protein_id="AAH94542.1"
/db_xref="GeneID:67948"
/db_xref="MGI:MGI:1261890"
/translation="MAAASEERMAEEGGGGHGDGGSCSAAGSAQRQPPAPPSQAPPPG
SQAPAAPALAPDHLPQNNTLVALPIVAIENILSFMSYDEISQLRLVCKRMDLVCQRML
NQGFLKVERFHNLCQKQVKAQLPRRESERRNHSLARHADILAAVETRLSLLNMTFMKY
VDSNLCCFIPGKVIDEIYRVLRYVNSTRAPQRAHEVLQELRDISSMAMEYFDEKIVPI
LKRKLPGSDVSGRLMGSPPVPGPSAALTTMQLFSKQNPSRQEVTKLQQQVRTNGAGVT
VLRREISELRTKVQEQQKQLQDQDQKLLEQTQIIGEQNARLAELERKLREVMESAVGT
SSGSGQSEESPRKRRKATEAIDSLRKSKRLRNRK"
BASE COUNT 1312 a 1129 c 1129 g 1362 t
ORIGIN
1 ggaatcaaac tcccaagatg gcggcggcgt ctgaggagcg gatggctgag gaaggaggcg
61 gcggccacgg cgacggcggc tcctgttcgg ctgccggctc cgctcagcga cagcccccgg
121 cgcccccgtc gcaggccccg ccgcccgggt cccaggcacc cgccgcgccc gcgctggcac
181 cggaccacct gccccaaaac aacacactgg tggcgctgcc catcgtagcc atcgagaaca
241 tcctcagctt tatgtcctac gacgaaatta gccagctccg cctggtttgt aagagaatgg
301 acctggtctg tcagagaatg ttgaatcagg ggtttctgaa agtggagagg ttccataacc
361 tgtgtcagaa gcaagttaaa gcacagctac cgaggagaga gtcagaaaga agaaaccatt
421 ctttagctcg tcatgcagac atccttgccg ctgtggaaac gaggttgtca ctgttgaata
481 tgaccttcat gaagtatgtg gattccaacc tctgttgctt catcccagga aaggtgattg
541 atgagattta ccgtgtactg agatatgtca attctaccag agcccctcag cgagctcacg
601 aggtgctgca ggagttacgg gatatctcct ccatggcgat ggagtacttt gatgagaaga
661 ttgttccaat tttgaagagg aaattgccag gatcagatgt gtcaggaaga ctcatgggct
721 ctcctccagt tcccgggcca tccgcagccc tgacaacaat gcagctcttc tccaagcaaa
781 acccgtccag acaagaggtt accaaactgc agcagcaggt cagaaccaac ggcgctggcg
841 tgactgtcct caggcgtgag atttctgagc ttcgcaccaa agtgcaagag cagcagaaac
901 agcttcaaga ccaagaccag aaactgctcg agcagaccca gatcataggc gaacagaacg
961 cacggctggc agagctggaa cgcaagctcc gggaagtcat ggaaagtgca gtagggacct
1021 cctcagggtc tgggcagagt gaggagtccc ctcggaaacg acggaaggca acggaagcca
1081 tagactctct taggaaatcc aaacgacttc ggaataggaa gtagattgga atatggctct
1141 agctccagag gacgacgtcc gtggctgaga gtttaagcag ttactcctgt caggatatcg
1201 gagcaacatg gtgtccttag gcttccaggc gatcagacac aacttatact tggctcttgt
1261 ggttggcatc ctttgcgctt ctctggtgga gctgatgcac agacccgtct taccttgcaa
1321 tagatttgta ctaaccatgc ccattctatc gtgtttgggg gctaaccttg ctcctgtgca
1381 ggcgatgtgt taaggttatt tgtttctgca tatatgcaca ttacatacgg attttaaaca
1441 aacccattct tgacagacta aaagttaagt ttaatacata aaatgtcctg ttcacttgaa
1501 agaaaaaaaa aatctacttt ttaaatggac actatcttgt tttttgtttt ttgttttttt
1561 taaaaagttg actttttgtt tgttataagt gacctttgtc tggaatgtct gagacacggt
1621 tagtactttg gtattgaagt gatgggtgac agaaggactg agagtattgg ctgtagaggg
1681 ggctctacag tagcaactat ttttataaac tactggcaag gggtgtctcc aggcgttagg
1741 tacatgcttt cagttttctt tggggccgtg tcctccattt gcatggatgg atgcatgcat
1801 tgcctaggca gcgcacttca taccactcct gcactggtgt tgatcttgaa cctctagact
1861 tctccactgt tagagctgcg ccgacattga tttaagcact cagcagctta cctgtcggga
1921 gagagttgtc agtccatttg tcctccagtt ttacaggcac aagagactgt tagagtccat
1981 tgatgtatct cttctctgta gggttcaggt gtactggcta agacagaacc tcaaatccaa
2041 ggctctttct ttctatagac atcagacctc tgatctgact cagctctgtg ctcctgggtc
2101 aaccatgact tagtagggac ccaactgagg gaaagtttgt tgaagaaaat tatatcatga
2161 aaaaaacatt tcatttctgg ggcatgacct gagggaagct ttttcatacc actttcaagc
2221 tctcacataa ataactctga acagagcttt agtcttgttt gcactcctgt tttgagcttg
2281 taactggaaa agcctgtctt gcgctgtcag cctcctgaat ggtcacttta acaacctcca
2341 aattgtataa aatggttctt tctcccggtt gtatattttt gaaacattca actatcactg
2401 tcgtattttt attttaatta tgtactaaat tatgtagttt tgttctttta aacatctgtt
2461 gctttggact ttgtttattt atagtaaatg taggtgtaag atggtaaaaa ctatcccttt
2521 caggtgaaag ttgacccctg tgttacctga gggtttggta accccacagt gggagaaaag
2581 cacaaggttg tcatccgtcc agcgtgacac attatgcatc ctttaggtta cttttaccaa
2641 gtgacactct cctacgcact cttaagtgtt gtcccttcgt gatcctgccc ttgggttctg
2701 ttcaaatctc tgactttgaa agtccatcta caatgtagta tgtcttcagt gagaaacctt
2761 agcatggtat ccaagtgttt catgatttgt tgggaaggta attttaaaat aaacagtttc
2821 cttaaaagat ttgtcagcaa ggtcatccat aaaggtccct gtctggatct tcttttctca
2881 gcaggtctct tgcaatccta gaatgtagcc atatcaccgt agccttggag gagggccact
2941 gagcgcttaa gactccgaag cagcagcata caggatttca aaggagaatc cttatgcatc
3001 aaagaaaata agcctcaaat tatttcttca ataattatta aaaatttctc aaactatatc
3061 cagctagcct aaatgtagcc tctagtcttc catgagctag tctgataaag tggcttttct
3121 gagcacttac acagtaagca ggaaggggtc tacagtgcga gcctgtgatc tccagcccat
3181 cagacagagc tgtactgttt catgactata accttgagaa taaagctatg actcgcttgc
3241 cttaagcttc cctcagagta gctgacatgc taggaggttg tcttcgccat ttattaagac
3301 agctattggg ggtctgtaat gttcactttg ggagaccata gtggtatatg gagtctccaa
3361 atcatgcact attttaatag ctaaaactgg cttgccctag gaaaacttaa ccagccacct
3421 gggagagaac gcttgcattt cctggcagga tcttcctttg tttgcatcaa accattccca
3481 tgcctaagtt tgcccacagt ccacaccaca cacaggcggc atacacacat gaaaagaatg
3541 gacaggaggg gaggagaaca ggccctgtca ggccgagccc tgcttcgctc cccagacact
3601 ttgctcacat ggttcccagc catcatgggt tacagaggct ccaaactccc cttgtgatgt
3661 agagagagcc tggaggcaag ggggccatta actcctgttg tgaagactat ttgggtgccc
3721 catgtcgaaa gccactggtc caagttgaca ttttttttgg taaaacatga tttttggagt
3781 actgaactca caggggcttg ccttaattca gtagtttcaa gatgtatgcg ctatattcta
3841 tgtgttaaaa tggtaaaata ttctatgtag ccccaagagt gggtaaaaca gagtttaatg
3901 cctaaataaa taagctaaaa aggtgtcaca acagctggat tttttagaga aaatggacat
3961 ataaaaaata ggctatgcgt catgaacaga aactatggca ccttgggatc gcactactgc
4021 atgcactgtt ttgtatgcca tttcatagcc tgcactttaa cctccaaaga aatgctgcgt
4081 ggtgcctgtc ccctgtcagt gagcttatcc cggagtcggc gcttctattt cactctgctg
4141 agttagtctc ctagctggca ttcttatttg ggttctctgc ttccttagcc ataatacttt
4201 ctaggatctg agaactcctg tctcgtctat ttccaacagt gtcaaatcct aatttaatgt
4261 agattcatcc ttgccgatcc acacagtcat agatcctctt ctagtgtgaa tacttgttcg
4321 ttgcctgtac caaaccctca gaaagcagac actgtaagat ctgaaggtgg gaataaaagg
4381 cctgaaaggg gaacacacaa agcgatgccc ctgctggaga atggtggagt ctaacaggag
4441 gctgagcttc ctgctgaatg cttgagatct gcatgaggtc cttcggggca gaagaggttc
4501 cattataact aacttaaatg tagagcccgt cctcgggaaa ttatcaacaa aacactaagt
4561 ccacaaaagc cagtggctgc tactggtgga aggtggccac ttcctgctct cactttgagc
4621 agccgtcctt cactcaaatc gaaactaagg cacgcttgag tgaggttggc ctttcccaat
4681 ttcccaagaa tccttgttaa atttttaaag ctcaagcatt aaattcacct tcttcccatt
4741 gtgtcagaag atagccacga gctttagaag cctgggaatc aggtcaggct attgccaaag
4801 tctagtggtt cgtgctgcca aaaggttaga catgttttaa aaactccttt atgtggtacc
4861 attgtctgtt tacttaatgc tcatgagcaa caataaacca ctagtttacc gtcaaaaaaa
4921 aaaaaaaaaa aa
//