LOCUS BC093953 404 bp mRNA linear HUM 26-APR-2005 DEFINITION Homo sapiens defensin, alpha 6, Paneth cell-specific, mRNA (cDNA clone MGC:120988 IMAGE:7939798), complete cds. ACCESSION BC093953 VERSION BC093953.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 404) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 404) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (11-APR-2005) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Ambion, and Mike Brownstein, NIMH cDNA Library Preparation: British Columbia Cancer Research Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRCB Plate: 1 Row: n Column: 20. FEATURES Location/Qualifiers source 1..404 /db_xref="H-InvDB:HIT000334928" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:120988 IMAGE:7939798" /tissue_type="Brain, heart and lung, PCR rescued clones" /clone_lib="NIH_MGC_319" /note="Vector: pCR4-TOPO with reversed insert; Clone identification sequence tag: AGAATCAC" gene 1..404 /gene="DEFA6" /gene_synonym="DEF6" /gene_synonym="HD-6" /db_xref="GeneID:1671" /db_xref="MIM:600471" CDS 22..324 /gene="DEFA6" /gene_synonym="DEF6" /gene_synonym="HD-6" /codon_start=1 /product="defensin, alpha 6, preproprotein" /protein_id="AAH93953.1" /db_xref="GeneID:1671" /db_xref="MIM:600471" /translation="MRTLTILTAVLLVALQAKAEPLQAEDDPLQAKAYEADAQEQRGA NDQDFAVSFAEDASSSLRALGSTRAFTCHCRRSCYSTEYSYGTCTVMGINHRFCCL" BASE COUNT 102 a 108 c 95 g 99 t ORIGIN 1 tctcctccag cgaccctagc catgagaacc ctcaccatcc tcactgctgt tctcctcgtg 61 gccctccagg ccaaggctga gccactccaa gctgaggatg atccactgca ggcaaaagct 121 tatgaggctg atgcccagga gcagcgtggg gcaaatgacc aggactttgc cgtctccttt 181 gcagaggatg caagctcaag tcttagagct ttgggctcaa caagggcttt cacttgccat 241 tgcagaaggt cctgttattc aacagaatat tcctatggga cctgcactgt catgggtatt 301 aaccacagat tctgctgcct ctgagggatg agaacagaga gaaatatatt cataatttac 361 tttatgacct agaaggaaac tgtcgtgtgt cccatacatt gcca //