LOCUS       BC093951                 404 bp    mRNA    linear   HUM 17-JUL-2006
DEFINITION  Homo sapiens defensin, alpha 6, Paneth cell-specific, mRNA (cDNA
            clone MGC:120986 IMAGE:7939796), complete cds.
ACCESSION   BC093951
VERSION     BC093951.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 404)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 404)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-APR-2005) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Ambion, and Mike Brownstein, NIMH
            cDNA Library Preparation: British Columbia Cancer Research Center
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Genome Sequence Centre,
            BC Cancer Agency, Vancouver, BC, Canada
            info@bcgsc.bc.ca
            Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
            Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
            Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
            Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
            Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
            Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
            Kim MacDonald,  Mike R. Mayo, Josh Moran, Diana Palmquist, JR
            Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
            Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRCB Plate: 1 Row: n Column: 18.
FEATURES             Location/Qualifiers
     source          1..404
                     /db_xref="H-InvDB:HIT000334926"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:120986 IMAGE:7939796"
                     /tissue_type="Brain, heart and lung, PCR rescued clones"
                     /clone_lib="NIH_MGC_319"
                     /note="Vector: pCR4-TOPO with reversed insert; Clone
                     identification sequence tag: ACATGTAC"
     gene            1..404
                     /gene="DEFA6"
                     /gene_synonym="DEF6"
                     /gene_synonym="HD-6"
                     /db_xref="GeneID:1671"
                     /db_xref="HGNC:HGNC:2765"
                     /db_xref="MIM:600471"
     CDS             22..324
                     /gene="DEFA6"
                     /gene_synonym="DEF6"
                     /gene_synonym="HD-6"
                     /codon_start=1
                     /product="defensin, alpha 6, Paneth cell-specific"
                     /protein_id="AAH93951.1"
                     /db_xref="GeneID:1671"
                     /db_xref="HGNC:HGNC:2765"
                     /db_xref="MIM:600471"
                     /translation="MRTLTILTAVLLVALQAKAEPLQAEDDPLQAKAYEADAQEQRGA
                     NDQDFAVSFAEDASSSLRALGSTRAFTCHCRRSCYSTEYSYGTCTVMGINHRFCCL"
BASE COUNT          102 a          108 c           95 g           99 t
ORIGIN      
        1 tctcctccag cgaccctagc catgagaacc ctcaccatcc tcactgctgt tctcctcgtg
       61 gccctccagg ccaaggctga gccactccaa gctgaggatg atccactgca ggcaaaagct
      121 tatgaggctg atgcccagga gcagcgtggg gcaaatgacc aggactttgc cgtctccttt
      181 gcagaggatg caagctcaag tcttagagct ttgggctcaa caagggcttt cacttgccat
      241 tgcagaaggt cctgttattc aacagaatat tcctatggga cctgcactgt catgggtatt
      301 aaccacagat tctgctgcct ctgagggatg agaacagaga gaaatatatt cataatttac
      361 tttatgacct agaaggaaac tgtcgtgtgt cccatacatt gcca
//