LOCUS BC093914 2018 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens RAB11 family interacting protein 4 (class II), mRNA
(cDNA clone MGC:120949 IMAGE:7939759), complete cds.
ACCESSION BC093914
VERSION BC093914.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2018)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2018)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-APR-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 1 Row: m Column: 5.
FEATURES Location/Qualifiers
source 1..2018
/db_xref="H-InvDB:HIT000334889"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:120949 IMAGE:7939759"
/tissue_type="Brain, cerebral cortex, PCR rescued clones"
/clone_lib="NIH_MGC_287"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: TACATCAC"
gene 1..2018
/gene="RAB11FIP4"
/gene_synonym="FLJ00131"
/gene_synonym="KIAA1821"
/gene_synonym="MGC11316"
/gene_synonym="RAB11-FIP4"
/db_xref="GeneID:84440"
/db_xref="HGNC:HGNC:30267"
CDS 33..1946
/gene="RAB11FIP4"
/gene_synonym="FLJ00131"
/gene_synonym="KIAA1821"
/gene_synonym="MGC11316"
/gene_synonym="RAB11-FIP4"
/codon_start=1
/product="RAB11 family interacting protein 4 (class II)"
/protein_id="AAH93914.1"
/db_xref="GeneID:84440"
/db_xref="HGNC:HGNC:30267"
/translation="MAGGAGWSGAPAALLRSVRRLREVFEVCGRDPDGFLRVERVAAL
GLRFGQGEEVEKLVKYLDPNDLGRINFKDFCRGVFAMKGCEELLKDVLSVESAGTLPC
APEIPDCVEQGSEVTGPTFADGELIPREPGFFPEDEEEAMTLAPPEGPQELYTDSPME
STQSLEGSVGSPAEKDGGLGGLFLPEDKSLVHTPSMTTSDLSTHSTTSLISNEEQFED
YGEGDDVDCAPSSPCPDDETRTNVYSDLGSSVSSSAGQTPRKMRHVYNSELLDVYCSQ
CCKKINLLNDLEARLKNLKANSPNRKISSTAFGRQLMHSSNFSSSNGSTEDLFRDSID
SCDNDITEKVSFLEKKVTELENDSLTNGDLKSKLKQENTQLVHRVHELEEMVKDQETT
AEQALEEEARRHREAYGKLEREKATEVELLNARVQQLEEENTELRTTVTRLKSQTEKL
DEERQRMSDRLEDTSLRLKDEMDLYKRMMDKLRQNRLEFQKEREATQELIEDLRKELE
HLQMYKLDCERPGRGRSASSGLGEFNARAREVELEHEVKRLKQENYKLRDQNDDLNGQ
ILSLSLYEAKNLFAAQTKAQSLAAEIDTASRDELMEALKEQEEINFRLRQYMDKIILA
ILDHNPSILEIKH"
BASE COUNT 484 a 550 c 665 g 319 t
ORIGIN
1 aggggtccgg gctgagctgc gggccggccc ggatggcggg cggcgcgggc tggtcgggcg
61 cccccgcggc tctgctgcgc tccgtgcgcc gcctgcgcga ggtgttcgag gtgtgcggcc
121 gcgaccccga cggcttcctg cgcgtggagc gcgtcgcggc gctcggactg cgcttcggcc
181 agggcgagga ggtggaaaaa cttgtgaaat atttggatcc caacgacctg gggagaatca
241 acttcaagga cttttgccgg ggggtgttcg ccatgaaagg gtgcgaggag ctgctgaagg
301 atgtgctgtc ggtggagagc gcggggacgc tgccgtgcgc gccagagatc ccagactgcg
361 tggagcaggg cagcgaggtc acaggcccca cctttgctga tggcgagctc atccccaggg
421 aacccggctt ttttcccgag gacgaggagg aggctatgac gctggcgcca cctgagggcc
481 cccaggagtt gtacacagac agccccatgg agagcactca gagcctggag gggtctgtcg
541 ggagtcctgc cgagaaggac gggggacttg ggggcctgtt tctgccagaa gacaagtccc
601 tggtccacac tccatccatg acgacctcag acctttctac acactccacc acctcgctca
661 tcagcaatga ggagcagttt gaagactatg gggagggtga cgatgtggac tgtgccccca
721 gcagcccttg ccccgatgat gagaccagga ccaacgtcta ctcggacctg gggtcttcgg
781 tgtcttccag tgcggggcag acgcctagga aaatgcggca cgtgtacaac agcgaattgc
841 tagatgttta ctgctctcaa tgctgcaaga aaatcaacct gctcaatgac ttggaagccc
901 gactgaaaaa cctgaaggcc aacagcccca accgaaagat ctccagcacg gcctttggac
961 ggcagctcat gcacagcagc aacttcagca gcagcaatgg cagcaccgaa gacctgttcc
1021 gggacagcat tgactcttgc gacaatgaca tcacagagaa ggtaagcttc ctggaaaaga
1081 aggtgacaga gctggagaat gacagcctga ccaatgggga cctgaagagc aagctgaagc
1141 aagagaacac acagctggtg cacagggtgc atgagctgga ggagatggtg aaggatcagg
1201 agaccacggc cgagcaggct ctggaggagg aggcgcggcg ccaccgcgag gcctacggca
1261 agctggagag ggagaaggct accgaggtgg agctgctcaa tgccagggtg cagcagttgg
1321 aggaagaaaa tacagagctt agaacaacag tgactcggct caagtctcaa acagagaaac
1381 tggatgagga gcggcagcgc atgtctgacc gtctggagga caccagcctg cggctcaaag
1441 atgagatgga cctgtacaag cgcatgatgg acaagctgcg acagaaccgc cttgagttcc
1501 agaaggagcg ggaggcgacg caggagctca tcgaggactt gcggaaggag ctggagcacc
1561 tgcagatgta caagctggac tgcgagcggc caggcagggg ccgcagtgcc tcctctggcc
1621 taggcgagtt caatgccagg gcccgcgagg tggagctcga gcacgaggtc aagcggctca
1681 agcaggagaa ttataagctg cgggatcaga acgacgactt gaatgggcag attttgagcc
1741 tcagcctcta cgaagcaaaa aacctctttg ctgcccagac taaagcccag tctctggctg
1801 cagagataga caccgcctcg cgcgatgagc taatggaagc cctgaaggag caggaggaga
1861 tcaacttccg gctgaggcag tacatggaca agattatcct cgccatcctg gaccacaatc
1921 cctccatcct cgagatcaaa cactaaggca cggggctggc tgcagagcag ccttaggacc
1981 ctgggaccaa gggcagaccc tgcccaagga tgcaggcc
//